LOCUS AK304193 1973 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56288 complete cds, highly similar to Protein
numb homolog.
ACCESSION AK304193
VERSION AK304193.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1973)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1973
/clone="TRACH3015747"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498817"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 124..1935
/codon_start=1
/note="highly similar to Protein numb homolog"
/protein_id="BAG65073.1"
/transl_table=1
/translation="MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYL
GHVEVDESRGMHICEDAVKRLKAERKFFKGFFGKTGKKAVKAVLWVSADGLRVVDEKT
KDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGC
AFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKK
AETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGS
FRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQI
TNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEA
DRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVV
PALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSL
VRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVD
PFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL"
BASE COUNT 513 a 544 c 460 g 456 t
ORIGIN
1 cggggaagag tgccagtgca gccactgtta caattcaaga tcttgatcta tatccataga
61 ttggaatatt ggtgggccag caatcctcag gcgcctcact taggacaagc tgtaaaaatt
121 aaaatgaaca aattacggca aagttttagg agaaagaagg atgtttatgt tccagaggcc
181 agtcgtccac atcagtggca gacagatgaa gaaggcgttc gcaccggaaa atgtagcttc
241 ccggttaagt accttggcca tgtagaagtt gatgaatcaa gaggaatgca catctgtgaa
301 gatgctgtaa aaagattgaa agctgaaagg aagttcttca aaggcttctt tggaaaaact
361 ggaaagaaag cagttaaagc agttctgtgg gtctcagcag atggactcag agttgtggat
421 gaaaaaacta aggacctcat agttgaccag acgatagaga aagtttcttt ctgtgcccca
481 gacaggaact ttgatagagc cttttcttac atatgccgtg atggcaccac tcgtcgctgg
541 atctgtcact gcttcatggc tgtcaaggac acaggtgaaa ggttgagcca tgcagtaggc
601 tgtgcttttg cagcctgttt agagcgcaag cagaagcggg agaaggaatg tggagtgact
661 gctacttttg atgctagtcg gaccactttt acaagagaag gatcattccg tgtcacaaca
721 gccactgaac aagcagaaag agaggagatc atgaaacaaa tgcaagatgc caagaaagct
781 gaaacagata agatagtcgt tggttcatca gttgcccctg gcaacactgc cccatcccca
841 tcctctccca cctctcctac ttctgatgcc acgacctctc tggagatgaa caatcctcat
901 gccatcccac gccggcatgc tccaattgaa cagcttgctc gccaaggctc tttccgaggt
961 tttcctgctc ttagccagaa gatgtcaccc tttaaacgcc aactatccct acgcatcaat
1021 gagttgcctt ccactatgca gaggaagact gatttcccca ttaaaaatgc agtgccagaa
1081 gtagaagggg aggcagagag catcagctcc ctgtgctcac agatcaccaa tgccttcagc
1141 acacctgagg accccttctc atctgctccg atgaccaaac cagtgacagt ggtggcacca
1201 caatctccta ccttccaagg gaccgagtgg ggtcaatctt ctggtgctgc ctctccaggt
1261 ctcttccagg ccggtcatag acgtactccc tctgaggccg accgatggtt agaagaggtg
1321 tctaagagcg tccgggctca gcagccccag gcctcagctg ctcctctgca gccagttctc
1381 cagcctcctc cacccactgc catctcccag ccagcatcac ctttccaagg gaatgcattc
1441 ctcacctctc agcctgtgcc agtgggtgtg gtcccagccc tgcaaccagc ctttgtccct
1501 gcccagtcct atcctgtggc caatggaatg ccctatccag cccctaatgt gcctgtggtg
1561 ggcatcactc cctcccagat ggtggccaac gtatttggca ctgcaggcca ccctcaggct
1621 gcccatcccc atcagtcacc cagcctggtc aggcagcaga cattccctca ctacgaggca
1681 agcagtgcta ccaccagtcc cttctttaag cctcctgctc agcacctcaa cggttctgca
1741 gctttcaatg gtgtagatga tggcaggttg gcctcagcag acaggcatac agaggttcct
1801 acaggcacct gcccagtgga tccttttgaa gcccagtggg ctgcattaga aaataagtcc
1861 aagcagcgta ctaatccctc ccctaccaac cctttctcca gtgacttaca gaagacgttt
1921 gaaattgaac tttaagcaat cattatggct atgtatcttg tccataccag aca
//