LOCUS AK304183 3541 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54402 complete cds, highly similar to Integrin alpha-10. ACCESSION AK304183 VERSION AK304183.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3541) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3541 /clone="TRACH3015050" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000498807" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 108..3395 /codon_start=1 /note="highly similar to Integrin alpha-10" /protein_id="BAG65063.1" /transl_table=1 /translation="MNITHAYSQGHQKLNLDTVSYNMLGVDSDGCWWAPPGMGLQATG GGAHNAPCAKGHLGDYQLGNSSHPAVNMHLGMSLLETDGDGGFMACAPLWSRACGSSV FSSGICARVDASFQPQGSLAPTAQRCPTYMDVVIVLDGSNSIYPWSEVQTFLRRLVGK LFIDPEQIQVGLVQYGESPVHEWSLGDFRTKEEVVRAAKNLSRREGRETKTAQAIMVA CTEGFSQSHGGRPEAARLLVVVTDGESHDGEELPAALKACEAGRVTRYGIAVLGHYLR RQRDPSSFLREIRTIASDPDERFFFNVTDEAALTDIVDALGDRIFGLEGSHAENESSF GLEMSQIGFSTHRLKDGILFGMVGANDWGGSVLWLEGGHRLFPPRMALEDEFPPALQN HAAYLGYSVSSMLLRGGRRLFLSGAPRFRHRGKVIAFQLKKDGAVRVAQSLQGEQIGS YFGSELCPLDTDRDGTTDVLLVAAPMFLGPQNKETGRVYVYLVGQQSLLTLQGTLQPE PPQDARFGFAMGALPDLNQDGFADVAVGAPLEDGHQGALYLYHGTQSGVRPHPAQRIA AASMPHALSYFGRSVDGRLDLDGDDLVDVAVGAQGAAILLSSRPIVHLTPSLEVTPQA ISVVQRDCRRRGQEAVCLTAALCFQVTSRTPGRWDHQFYMRFTASLDEWTAGARAAFD GSGQRLSPRRLRLSVGNVTCEQLHFHVLDTSDYLRPVALTVTFALDNTTKPGPVLNEG SPTSIQKLVPFSKDCGPDNECVTDLVLQVNMDIRGSRKAPFVVRGGRRKVLVSTTLEN RKENAYNTSLSLIFSRNLHLASLTPQRESPIKVECAAPSAHARLCSVGHPVFQTGAKV TFLLEFEFSCSSLLSQVFVKLTASSDSLERNGTLQDNTAQTSAYIQYEPHLLFSSEST LHRYEVHPYGTLPVGPGPEFKTTLRVQNLGCYVVSGLIISALLPAVAHGGNYFLSLSQ VITNNASCIVQNLTEPPGPPVHPEELQHTNRLAKFKSLTVVSTFELGTEEGSVLQLTE ASRWSESLLEVVQTRPILISLWILIGSVLGGLLLLALLVFCLWKLGFFAHKKIPEEEK REEKLEQ" BASE COUNT 776 a 951 c 984 g 830 t ORIGIN 1 acttctcata ctggacagaa accgatcagg catggaactc cccttcgtca ctcacctgtt 61 cttgcccctg gtgttcctga caggtctctg ctcccccttt aacctggatg aacatcaccc 121 acgcctattc ccagggccac cagaagctga atttggatac agtgtcttac aacatgttgg 181 gggtggacag cgatggatgc tggtgggcgc cccctgggat gggccttcag gcgaccggag 241 ggggggccca caatgcccca tgtgccaagg gccacttagg tgactaccaa ctgggaaatt 301 catctcatcc tgctgtgaat atgcacctgg ggatgtctct gttagagaca gatggtgatg 361 ggggattcat ggcctgtgcc cctctctggt ctcgtgcttg tggcagctct gtcttcagtt 421 ctgggatatg tgcccgtgtg gatgcttcat tccagcctca gggaagcctg gcacccactg 481 cccaacgctg cccaacatac atggatgttg tcattgtctt ggatggctcc aacagcatct 541 acccctggtc tgaagttcag accttcctac gaagactggt agggaaactg tttattgacc 601 cagaacagat acaggtggga ctggtacagt atggggagag ccctgtacat gagtggtccc 661 tgggagattt ccgaacgaag gaagaagtgg tgagagcagc aaagaacctc agtcggcggg 721 agggacgaga aacaaagact gcccaagcaa taatggtggc ctgcacagaa gggttcagtc 781 agtcccatgg gggccgaccc gaggctgcca ggctactggt ggttgtcact gatggagagt 841 cccatgatgg agaggagctt cctgcagcac taaaggcctg tgaggctgga agagtgacac 901 gctatgggat tgcagtcctt ggtcactacc tccggcggca gcgagatccc agctctttcc 961 tgagagaaat tagaactatt gccagtgatc cagatgagcg attcttcttc aatgtcacag 1021 atgaggctgc tctgactgac attgtggatg cactaggaga tcggattttt ggccttgaag 1081 ggtcccatgc agaaaacgaa agctcctttg ggctggaaat gtctcagatt ggtttctcca 1141 ctcatcggct aaaggatggg attctttttg ggatggtggg ggccaatgac tggggaggct 1201 ctgtgctatg gcttgaagga ggccaccgcc ttttcccccc acgaatggca ctggaagacg 1261 agttcccccc tgcattgcag aaccatgcag cctacctggg ttactctgtt tcttccatgc 1321 ttttgcgggg tggacgccgc ctgtttctct ctggggctcc tcgatttaga catcgaggaa 1381 aagtcatcgc cttccagctt aagaaagatg gggctgtgag ggttgcccag agcctccagg 1441 gggagcagat tggttcatac tttggcagtg agctctgccc attggataca gatagggatg 1501 gaacaactga tgtcttactt gtggctgccc ccatgttcct gggaccccag aacaaggaaa 1561 caggacgtgt ttatgtgtat ctggtaggcc agcagtcctt gctgaccctc caaggaacac 1621 ttcagccaga acccccccag gatgctcggt ttggctttgc catgggagct cttcctgatc 1681 tgaaccaaga tggttttgct gatgtggctg tgggggcgcc tctggaagat gggcaccagg 1741 gagcactgta cctgtaccat ggaacccaga gtggagtcag gccccatcct gcccagagga 1801 ttgctgctgc ctccatgcca catgccctca gctactttgg ccgaagtgtg gatggtcggc 1861 tagatctgga tggagatgat ctggtcgatg tggctgtggg tgcccagggg gcagccatcc 1921 tgctcagctc ccggcccatt gtccatctga ccccatcact ggaggtgacc ccacaggcca 1981 tcagtgtggt tcagagggac tgtaggcggc gaggccaaga ggcagtctgt ctgactgcag 2041 ccctttgctt ccaagtgacc tcccgtactc ctggtcgctg ggatcaccaa ttctacatga 2101 ggttcaccgc atcactggat gaatggactg ctggggcacg tgcagcattt gatggctctg 2161 gccagaggtt gtcccctcgg aggctccggc tcagtgtggg gaatgtcact tgtgagcagc 2221 tacacttcca tgtgctggat acatcagatt acctccggcc agtggccttg actgtgacct 2281 ttgccttgga caatactaca aagccagggc ctgtgctgaa tgagggctca cccacctcta 2341 tacaaaagct ggtccccttc tcaaaggatt gtggccctga caatgaatgt gtcacagacc 2401 tggtgcttca agtgaatatg gacatcagag gctccaggaa ggccccattt gtggttcgag 2461 gtggccggcg gaaagtgctg gtatctacaa ctctggagaa cagaaaggaa aatgcttaca 2521 atacgagcct gagtctcatc ttctctagaa acctccacct ggccagtctc actcctcaga 2581 gagagagccc aataaaggtg gaatgtgccg ccccttctgc tcatgcccgg ctctgcagtg 2641 tggggcatcc tgtcttccag actggagcca aggtgacctt tctgctagag tttgagttta 2701 gctgctcctc tctcctgagc caggtcttcg tgaagctgac tgccagcagt gacagcctgg 2761 agagaaatgg gacccttcaa gataacacag cccagacctc agcctacatc caatatgagc 2821 cccacctcct gttctctagt gagtctaccc tgcaccgcta tgaggttcac ccatatggga 2881 ccctcccagt gggtcctggc ccagaattca aaaccactct cagggttcag aacctaggct 2941 gctatgtggt cagtggcctc atcatctcag ccctccttcc agctgtggcc catgggggca 3001 attacttcct atcactgtct caagtcatca ctaacaatgc aagctgcata gtgcagaacc 3061 tgactgaacc cccaggccca cctgtgcatc cagaggagct tcaacacaca aacagactgg 3121 ccaagttcaa gtccctgacg gtggtcagca cctttgagct gggaaccgaa gagggcagtg 3181 tcctacagct gactgaagcc tcccgttgga gtgagagcct cttggaggtg gttcagaccc 3241 ggcctatcct catctccctg tggatcctca taggcagtgt cctgggaggg ttgctcctgc 3301 ttgctctcct tgtcttctgc ctgtggaagc ttggcttctt tgcccataag aaaatccctg 3361 aggaagaaaa aagagaagag aagttggagc aatgaatgta gaataagggt ctagaaagtc 3421 ctccctggca gcttcttcaa gagacttgca taaaagcaga ggtttggggg ctcagatggg 3481 acaagaagcc gcctctggac tatctcccca gaccagcagc ctgacttgac ttttgagtcc 3541 t //