LOCUS AK304182 4486 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61543 complete cds, highly similar to
Desmoplakin.
ACCESSION AK304182
VERSION AK304182.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4486)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4486
/clone="TRACH3014955"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498806"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 245..4297
/codon_start=1
/note="highly similar to Desmoplakin"
/protein_id="BAG65062.1"
/transl_table=1
/translation="MSCNGGSHPRINTLGRMIRAESGPDLRYEVTSGGGGTSRMYYSR
RGVITDQNSDGYCQTGTMSRHQNQNTIQELLQNCSDCLMRAELIVQPELKYGDGIQLT
RSRELDECFAQANDQMEILDSLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPR
VRRASSKGGGGYTCQSGSGWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHI
NSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNII
QATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESD
QLVLNQHPASDKIEAYMDTPQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYL
KGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKP
RNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSV
GLIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIA
KLKTMRQEDYMKTIADLELHYQEFIRNSQGSEMFGDDDKRKIQSQFTDAQKHYQTLVI
QLPGYPQHQTVTTTEITHHGTCQDVNHNKVIETNRENDKQETWMLMELQKIRRQIEHC
EGRMTLKNLPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGSEKYC
YLQNEVFGLFQKLENINGVTDGYLNSLCTVRALLQAILQTEDMLKVYEARLTEEETVC
LDLDKVEAYRCGLKKIKNDLNLKKSLLATMKTELQKAQQIHSQTSQQYPLYDLDLGKF
GEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNYRDNYQAFCKWLYDAKRRQDSLES
MKFGDSNTVMRFLNEQKNLHSEISGKRDKSEEVQKIAELCANSIKDYELQLASYTSGL
ETLLNIPIKRTMIQSPSGVILQEAADVHARYIELLTRSGDYYRFLSEMLKSLEDLKLK
NTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAECSQFKAKLASLEELKRQAEL
DGKSAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKSVEDRFDQQKNDYDQLQKAR
QCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGTRKMSAAEAVKEKWLPYEAGQR
FLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGRAAQRLQDTSSYAKILTCPKTKLKI
SYKDAINRSMVEDITGLRLLEAASVSSKGLPSPYNMSSAPGSRSGSRSGSRSGSRSGS
RSGSRRGSFDATGNSSYSYSYSFSSSSIGH"
BASE COUNT 1307 a 1099 c 1149 g 931 t
ORIGIN
1 ctctgcgccc ttgccgccct ccgagccaca gctttcctcc cgctcctgcc cccggcccgt
61 cgccgtctcc gcgctcgcag cggcctcggg agggcccagg tagcgagcag cgacctcgcg
121 agccttccgc actcccgccc ggttccccgg ccgtccgcct acccttggcc ccctccgctt
181 tctccgcgcc ggcccgcctc gcttatgcct cggcgctgag ccgctctccc gattgcccgc
241 cgacatgagc tgcaacggag gctcccaccc gcggatcaac actctgggcc gcatgatccg
301 cgccgagtct ggcccggacc tgcgctacga ggtgaccagc ggcggcgggg gcaccagcag
361 gatgtactac tctcggcgcg gcgtgatcac cgaccagaac tcggacggct actgtcaaac
421 cggcacgatg tccaggcacc agaaccagaa caccatccag gagctgctgc agaactgctc
481 cgactgcttg atgcgagcag agctcatcgt gcagcctgaa ttgaagtatg gagatggaat
541 acaactgact cggagtcgag aattggatga gtgttttgcc caggccaatg accaaatgga
601 aatcctcgac agcttgatca gagagatgcg gcagatgggc cagccctgtg atgcttacca
661 gaaaaggctt cttcagctcc aagagcaaat gcgagccctt tataaagcca tcagtgtccc
721 tcgagtccgc agggccagct ccaagggtgg tggaggctac acttgtcaga gtggctctgg
781 ctgggatgag ttcaccaaac atgtcaccag tgaatgtttg gggtggatga ggcagcaaag
841 ggcggagatg gacatggtgg cctggggtgt ggacctggcc tcagtggagc agcacattaa
901 cagccaccgg ggcatccaca actccatcgg cgactatcgc tggcagctgg acaaaatcaa
961 agccgacctg cgcgagaaat ctgcgatcta ccagttggag gaggagtatg aaaacctgct
1021 gaaagcgtcc tttgagagga tggatcacct gcgacagctg cagaacatca ttcaggccac
1081 gtccagggag atcatgtgga tcaatgactg cgaggaggag gagctgctgt acgactggag
1141 cgacaagaac accaacatcg ctcagaaaca ggaggccttc tccatacgca tgagtcaact
1201 ggaagttaaa gaaaaagagc tcaataagct gaaacaagaa agtgaccaac ttgtcctcaa
1261 tcagcatcca gcttcagaca aaattgaggc ctatatggac actccgcaga cgcagtggag
1321 ttggattctt cagatcacca agtgcattga tgttcatctg aaagaaaatg ctgcctactt
1381 tcagtttttt gaagaggcgc agtctactga agcatacctg aaggggctcc aggactccat
1441 caggaagaag tacccctgcg acaagaacat gcccctgcag cacctgctgg aacagatcaa
1501 ggagctggag aaagaacgag agaaaatcct tgaatacaag cgtcaggtgc agaacttggt
1561 aaacaagtct aagaagattg tacagctgaa gcctcgtaac ccagactaca gaagcaataa
1621 acccattatt ctcagagctc tctgtgacta caaacaagat cagaaaatcg tgcataaggg
1681 ggatgagtgt atcctgaagg acaacaacga gcgcagcaag tggtacgtga cgggcccggg
1741 aggcgttgac atgcttgttc cctctgtggg gctgatcatc cctcctccga acccactggc
1801 cgtggacctc tcttgcaaga ttgagcagta ctacgaagcc atcttggctc tgtggaacca
1861 gctctacatc aacatgaaga gcctggtgtc ctggcactac tgcatgattg acatagagaa
1921 gatcagggcc atgacaatcg ccaagctgaa aacaatgcgg caggaagatt acatgaagac
1981 gatagccgac cttgagttac attaccaaga gttcatcaga aatagccaag gctcagagat
2041 gtttggagat gatgacaagc ggaaaataca gtctcagttc accgatgccc agaagcatta
2101 ccagaccctg gtcattcagc tccctggcta tccccagcac cagacagtga ccacaactga
2161 aatcactcat catggaacct gccaagatgt caaccataat aaagtaattg aaaccaacag
2221 agaaaatgac aagcaagaaa catggatgct gatggagctg cagaagattc gcaggcagat
2281 agagcactgc gagggcagga tgactctcaa aaacctccct ctagcagacc aggggtcttc
2341 tcaccacatc acagtgaaaa ttaacgagct taagagtgtg cagaatgatt cacaagcaat
2401 tgctgaggtt ctcaaccagc ttaaagatat gcttgccaac ttcagaggtt ctgaaaagta
2461 ctgctattta cagaatgaag tatttggact atttcagaaa ctggaaaata tcaatggtgt
2521 tacagatggc tacttaaata gcttatgcac agtaagggca ctgctccagg ctattctcca
2581 aacagaagac atgttaaagg tttatgaagc caggctcact gaggaggaaa ctgtctgcct
2641 ggacctggat aaagtggaag cttaccgctg tggactgaag aaaataaaaa atgacttgaa
2701 cttgaagaag tcgttgttgg ccactatgaa gacagaacta cagaaagccc agcagatcca
2761 ctctcagact tcacagcagt atccacttta tgatctggac ttgggcaagt tcggtgaaaa
2821 agtcacacag ctgacagacc gctggcaaag gatagataaa cagatcgact ttagattatg
2881 ggacctggag aaacaaatca agcaattgag gaattatcgt gataactatc aggctttctg
2941 caagtggctc tatgatgcta aacgccgcca ggattcctta gaatccatga aatttggaga
3001 ttccaacaca gtcatgcggt ttttgaatga gcagaagaac ttgcacagtg aaatatctgg
3061 caaacgagac aaatcagagg aagtacaaaa aattgctgaa ctttgcgcca attcaattaa
3121 ggattatgag ctccagctgg cctcatacac ctcaggactg gaaactctgc tgaacatacc
3181 tatcaagagg accatgattc agtccccttc tggggtgatt ctgcaagagg ctgcagatgt
3241 tcatgctcgg tacattgaac tacttacaag atctggagac tattacaggt tcttaagtga
3301 gatgctgaag agtttggaag atctgaagct gaaaaatacc aagatcgaag ttttggaaga
3361 ggagctcaga ctggcccgag atgccaactc ggaaaactgt aataagaaca aattcctgga
3421 tcagaacctg cagaaatacc aggcagagtg ttcccagttc aaagcgaagc ttgcgagcct
3481 ggaggagctg aagagacagg ctgagctgga tgggaagtcg gctaagcaaa atctagacaa
3541 gtgctacggc caaataaaag aactcaatga gaagattacc cgactgactt atgagattga
3601 agatgaaaag agaagaagaa aatctgtgga agacagattt gaccaacaga agaatgacta
3661 tgaccaactg cagaaagcaa ggcaatgtga aaaggagaac cttggttggc agaaattaga
3721 gtctgagaaa gccatcaagg agaaggagta cgagattgaa aggttgaggg ttctactgca
3781 ggaagaaggc acccggaaga tgtcagcagc agaggcagtg aaagaaaaat ggctcccgta
3841 tgaggctggc cagcgcttcc tggagttcca gtacctcacg ggaggtcttg ttgacccgga
3901 agtgcatggg aggataagca ccgaagaagc catccggaag gggttcatag atggccgcgc
3961 cgcacagagg ctgcaagaca ccagcagcta tgccaaaatc ctgacctgcc ccaaaaccaa
4021 attaaaaata tcctataagg atgccataaa tcgctccatg gtagaagata tcactgggct
4081 gcgccttctg gaagccgcct ccgtgtcgtc caagggctta cccagccctt acaacatgtc
4141 ttcggctccg ggctcccgct ccggctcccg ctcgggatct cgctccggat ctcgctccgg
4201 gtcccgcagt gggtcccgga gaggaagctt tgacgccaca gggaattctt cctactctta
4261 ttcctactca tttagcagta gttctattgg gcactagtag tcagttggga gtggttgcta
4321 taccttgact tcatttatat gaatttccac tttattaaat aatagaaaag aaaatcccgg
4381 tgcttgcagt agagtgatag gacattctat gcttacagaa aatatagcca tgattgaaat
4441 caaatagtaa aggctgttct ggctttttat cttcttagct catctt
//