LOCUS AK304181 3400 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54574 complete cds, highly similar to
Staphylococcal nuclease domain-containing protein 1.
ACCESSION AK304181
VERSION AK304181.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3400)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3400
/clone="TRACH3014805"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498805"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 182..2851
/codon_start=1
/note="highly similar to Staphylococcal nuclease
domain-containing protein 1"
/protein_id="BAG65061.1"
/transl_table=1
/translation="MASSAQSGGSSGGPAVPTVQRGIIKMVLSGCAIIVRGQPRGGPP
PERQINLSNIRAGNLARRAAATQPDAKDTPDEPWAFPAREFLRKKLIGKEVCFTIENI
AESLVAEGLATRREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGSHTIRDLKYTIE
NPRHFVDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSE
TPEPFAAEAKFFTESRLFQRDVQIILESCHNQNILGTILHPNGNITELLLKEGFARCV
DWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVAPTANLDQKDKQFVAKVMQVLDADA
IVVKLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGK
KVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQ
RSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEA
VVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKE
LVLQREVEVEVESMDKAGNFIGWLHIDGANLSVLLVEHALSKVHFTAERSSYYKSLLS
AEEAAKQKKEKVWAHYEEQPVEEVMPVLEEKERSASYKPVFVTEITDDLHFYVQDVET
GTQLEKLMENMRNDIASHPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHV
FYIDYGNREVLPSTRLGTLSPAFSTRVLPAQATEYAFAFIQVPQDDDARTDAVDSVVR
DIQNTQCLLNVEHLSAGCPHVTLQFADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITE
YLNAQESAKSARLNLWRYGDFRADDADEFGYSR"
BASE COUNT 817 a 912 c 938 g 733 t
ORIGIN
1 tctttttcgc tccgtgtccc gctgctgctc ctgtgagcgc ccggcgagtc cgtcccgtcc
61 accgtccgca gctggtagcc agcctgcccc tcgcctcgac tccctttcac caacaccgac
121 acccacattg acacctccag tccggccagc cgctccactc gttgcctttg catctccaca
181 catggcgtcc tccgcgcaga gcggcggctc ctccggggga cccgcggtcc ccaccgtgca
241 gcggggcatc atcaagatgg tcctctcagg gtgcgccatc attgtccgag gtcagcctcg
301 tggtgggcct cctcctgagc ggcagatcaa cctcagcaac attcgtgctg gaaatcttgc
361 tcgccgggca gccgccacac aacctgatgc aaaggatacc cctgatgagc cctgggcatt
421 tccagctcga gagttccttc gaaagaagct gattgggaag gaagtctgtt tcacgataga
481 aaacattgca gaatcactgg ttgcagaggg cttagccacc cggagagaag gcatgagagc
541 taataatcct gagcagaacc ggctttcaga atgtgaagaa caagcaaagg cagccaagaa
601 agggatgtgg agtgagggga acggttcaca tactatccgg gatctcaagt ataccattga
661 aaacccaagg cactttgtgg actcacacca ccagaagcct gttaatgcta tcatcgagca
721 tgtgcgggac ggcagtgtgg tcagggccct gctcctccca gattactacc tggttacagt
781 catgctgtca ggcatcaagt gcccaacttt tcgacgggaa gcagatggca gtgaaactcc
841 agagcctttt gctgcagaag ccaaattttt cactgagtcg cgactgtttc agagagatgt
901 tcagatcatt ctggagagct gccacaacca gaacattctg ggtaccatcc ttcatccaaa
961 tggcaacatc acagagctcc tcctgaagga aggtttcgca cgctgtgtgg actggtcgat
1021 tgcagtttac acccggggcg cagaaaagct gagggcggca gagaggtttg ccaaagagcg
1081 caggctgaga atatggagag actatgtggc tcccacagct aatttggacc aaaaggacaa
1141 gcagtttgtt gccaaggtga tgcaggttct ggatgctgat gccattgttg tgaagctgaa
1201 ctcaggcgat tacaagacga ttcacctgtc cagcatccga ccaccgaggc tggaggggga
1261 gaacacccag gataagaaca agaaactgcg tcccctgtat gacattcctt acatgtttga
1321 ggcccgggaa tttcttcgaa aaaagcttat tgggaagaag gtcaatgtga cggtggacta
1381 cattagacca gccagcccag ccacagagac agtgcctgcc ttttcagagc gtacctgtgc
1441 cactgtcacc attggaggaa taaacattgc tgaggctctt gtcagcaaag gtctagccac
1501 agtgatcaga taccggcagg atgatgacca gagatcatca cactacgatg aactgcttgc
1561 tgcagaggcc agagctatta agaatggcaa aggattgcat agcaagaagg aagtgcctat
1621 ccaccgtgtt gcagatatat ctggggatac ccaaaaagca aagcagttcc tgccttttct
1681 tcagcgggca ggtcgttctg aagctgtggt ggaatacgtc ttcagtggtt ctcgtctcaa
1741 actctatttg ccaaaggaaa cttgccttat caccttcttg cttgcaggca ttgaatgccc
1801 cagaggagcc cgaaacctcc caggcttggt gcaggaagga gagcccttca gcgaggaagc
1861 tacacttttc accaaggaac tggtgctgca gcgagaggtg gaggtggagg tggagagcat
1921 ggacaaggcc ggcaacttta tcggctggct gcacatcgac ggtgccaacc tgtccgtcct
1981 gctggtggag cacgcgctct ccaaggtcca cttcaccgcc gaacgcagct cctactacaa
2041 gtccctgctg tctgccgagg aggccgcaaa gcagaagaaa gagaaggtct gggcccacta
2101 tgaggagcag cccgtggagg aggtgatgcc agtgctggag gagaaggagc gatctgctag
2161 ctacaagccc gtgtttgtga ccgagatcac tgatgacctg cacttctacg tgcaggatgt
2221 ggagaccggc acccagttgg agaagctgat ggagaacatg cgcaatgaca ttgccagtca
2281 cccccctgta gagggctcct atgccccccg caggggagag ttctgcattg ccaaatttgt
2341 agatggagaa tggtaccgtg cccgagtaga gaaagtcgag tctcctgcca aaatacatgt
2401 cttctacatt gactacggca acagagaggt cctgccatcc acccgcctgg gtaccctatc
2461 acctgccttc agcactcggg tgctgccagc tcaagccacg gagtatgcct tcgccttcat
2521 ccaggtgccc caagatgatg atgcccgcac ggacgccgtg gacagcgtag ttcgggatat
2581 ccagaacact cagtgcctgc tcaacgtgga acacctgagt gccggctgcc cccatgtcac
2641 cctgcagttt gcagattcca agggcgatgt ggggctgggc ttggtgaagg aagggctggt
2701 catggtggag gtgcgcaagg agaaacagtt ccagaaagtg atcacagaat acctgaatgc
2761 ccaagagtca gccaagagcg ccaggctgaa cctgtggcgc tatggagact ttcgagctga
2821 tgatgcagac gaatttggct acagccgcta aggaggggat cgggtttggc ccccagcccc
2881 gctcacgcca gtccctcttc ctctgccggg agggtgtttt caactccaaa ccccagagag
2941 gggttgtaga ttgggtccag ctttgcttca gtgtgtggaa atgtctcgtg gggtggcatc
3001 ggggctgcgg ggtggggacc ccaaggcttt ctggggcaga cccttgtcct ctgggatgat
3061 gggcactgct atccacagtc tctgccagtt ggttttattt ggaggtttgt gggctttttt
3121 aaaaaaaaaa aagtcctcaa atcaggaaga aacatcaaag actatgtcct agtggaggga
3181 gtaatcctaa cacccaggct ggccgccagc tggcacctgc ctctatccca gactgccctc
3241 gtcccagctc tctgtccaac tgttgattat gtgatttttc tgatacgtcc attctcaaat
3301 gccagtgtgt tcacatcttc gctctggcca gcccattctg tatttaaagc ttttgaggcc
3361 caataaaata gtacgtgctg tctgcaaaaa aaaaaaaaag
//