LOCUS AK304153 3245 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61696 complete cds, highly similar to
Double-stranded RNA-specific adenosine deaminase (EC 3.5.4.-).
ACCESSION AK304153
VERSION AK304153.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3245)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3245
/clone="TRACH3012617"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498777"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 197..3109
/codon_start=1
/note="highly similar to Double-stranded RNA-specific
adenosine deaminase (EC 3.5.4.-)"
/protein_id="BAH14119.1"
/transl_table=1
/translation="MNPRQGYSLSGYYTHPFQGYEHRQLRYQQPGPGSSPSSFLLKQI
EFLKGQLPEAPVIGKQTPSLPPSLPGLRPRFPVLLASSTRGRQVDIRGVPRGVHLGSQ
GLQRGFQHPSPRGRSLPQRGVDCLSSHFQELSIYQDQEQRILKFLEELGEGKATTAHD
LSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQAWNQHSGVVRPDGHSQ
GAPNSDPSLEPEDRNSTSVSEDLLEPFIAVSAQAWNQHSGVVRPDSHSQGSPNSDPGL
EPEDSNSTSALEDPLEFLDMAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINAVL
IDMERQGDVYRQGTTPPIWHLTDKKRERMQIKRNTNSVPETAPAAIPETRRNAEFLTC
NIPTSNASNNMVTTEKVENGQEPVIKLENRQEARPEPARLKPPVHYNGPSKAGYVDFE
NGQWATDDIPDDLNSIRAAPGEFRAIMEMPSFYSHGLPRCSPYKKLTECQLKNPISGL
LEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDAAMKAM
TILLEEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKSPVTTLLECMH
KLGNSCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQMAAEEAMKALHG
EATNSMASDNQPEGMISESLDNLESMMPNKVRKIGELVRYLNTNPVGGLLEYARSHGF
AAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIGENEK
AERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTFHDQIAMLSHRCFNTLT
NSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEII
SRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQKEHFSSAHCYLHFLCPVFCF"
BASE COUNT 892 a 860 c 819 g 674 t
ORIGIN
1 aaacgaaagc gaaattgaac cggagccatc ttgggcccgg cgcgcagacc cgcggagttt
61 cccgtgccga cgccccgggg ccacttccag tgcggagtag cggaggcgtg ggggcctcga
121 ggggctggcg cggcccagcg gtcgggccag ggtcgtgccg ccggcgggtc gggccgggca
181 atgcctcgcg ggcgcaatga atccgcggca ggggtattcc ctcagcggat actacaccca
241 tccatttcaa ggctatgagc acagacagct cagataccag cagcctgggc caggatcttc
301 ccccagtagt ttcctgctta agcaaataga atttctcaag gggcagctcc cagaagcacc
361 ggtgattggg aagcagacac cgtcactgcc accttccctc ccaggactcc ggccaaggtt
421 tccagtacta cttgcctcca gtaccagagg caggcaagtg gacatcaggg gtgtccccag
481 gggcgtgcat ctcggaagtc aggggctcca gagagggttc cagcatcctt caccacgtgg
541 caggagtctg ccacagagag gtgttgattg cctttcctca catttccagg aactgagtat
601 ctaccaagat caggaacaaa ggatcttaaa gttcctggaa gagcttgggg aagggaaggc
661 caccacagca catgatctgt ctgggaaact tgggactccg aagaaagaaa tcaatcgagt
721 tttatactcc ctggcaaaga agggcaagct acagaaagag gcaggaacac cccctttgtg
781 gaaaatcgcg gtctccactc aggcttggaa ccagcacagc ggagtggtaa gaccagacgg
841 tcatagccaa ggagccccaa actcagaccc gagtttggaa ccggaagaca gaaactccac
901 atctgtctca gaagatcttc ttgagccttt tattgcagtc tcagctcagg cttggaacca
961 gcacagcgga gtggtaagac cagacagtca tagccaagga tccccaaact cagacccagg
1021 tttggaacct gaagacagca actccacatc tgccttggaa gatcctcttg agtttttaga
1081 catggccgag atcaaggaga aaatctgcga ctatctcttc aatgtgtctg actcctctgc
1141 cctgaatttg gctaaaaata ttggccttac caaggcccga gatataaatg ctgtgctaat
1201 tgacatggaa aggcaggggg atgtctatag acaagggaca acccctccca tatggcattt
1261 gacagacaag aagcgagaga ggatgcaaat caagagaaat acgaacagtg ttcctgaaac
1321 cgctccagct gcaatccctg agaccagaag aaacgcagag ttcctcacct gtaatatacc
1381 cacatcaaat gcctcaaata acatggtaac cacagaaaaa gtggagaatg ggcaggaacc
1441 tgtcataaag ttagaaaaca ggcaagaggc cagaccagaa ccagcaagac tgaaaccacc
1501 tgttcattac aatggcccct caaaagcagg gtatgttgac tttgaaaatg gccagtgggc
1561 cacagatgac atcccagatg acttgaatag tatccgcgca gcaccaggtg agtttcgagc
1621 catcatggag atgccctcct tctacagtca tggcttgcca cggtgttcac cctacaagaa
1681 actgacagag tgccagctga agaaccccat cagcgggctg ttagaatatg cccagttcgc
1741 tagtcaaacc tgtgagttca acatgataga gcagagtgga ccaccccatg aacctcgatt
1801 taaattccag gttgtcatca atggccgaga gtttccccca gctgaagctg gaagcaagaa
1861 agtggccaag caggatgcag ctatgaaagc catgacaatt ctgctagagg aagccaaagc
1921 caaggacagt ggaaaatcag aagaatcatc ccactattcc acagagaaag aatcagagaa
1981 gactgcagag tcccagaccc ccaccccttc agccacatcc ttcttttctg ggaagagccc
2041 cgtcaccaca ctgcttgagt gtatgcacaa attggggaac tcctgcgaat tccgtctcct
2101 gtccaaagaa ggccctgccc atgaacccaa gttccaatac tgtgttgcag tgggagccca
2161 aactttcccc agtgtgagtg ctcccagcaa gaaagtggca aagcagatgg ccgcagagga
2221 agccatgaag gccctgcatg gggaggcgac caactccatg gcttctgata accagcctga
2281 aggtatgatc tcagagtcac ttgataactt ggaatccatg atgcccaaca aggtcaggaa
2341 gattggcgag ctcgtgagat acctgaacac caaccctgtg ggtggccttt tggagtacgc
2401 ccgctcccat ggctttgctg ctgaattcaa gttggtcgac cagtccggac ctcctcacga
2461 gcccaagttc gtttaccaag caaaagttgg gggtcgctgg ttcccagccg tctgcgcaca
2521 cagcaagaag caaggcaagc aggaagcagc agatgcggct ctccgtgtct tgattgggga
2581 gaacgagaag gcagaacgca tgggtttcac agaggtaacc ccagtgacag gggccagtct
2641 cagaagaact atgctcctcc tctcaaggtc cccagaagca cagccaaaga cactccctct
2701 cactggcagc accttccatg accagatagc catgctgagc caccggtgct tcaacactct
2761 gactaacagc ttccagccct ccttgctcgg ccgcaagatt ctggccgcca tcattatgaa
2821 aaaagactct gaggacatgg gtgtcgtcgt cagcttggga acagggaatc gctgtgtgaa
2881 aggagattct ctcagcctaa aaggagaaac tgtcaatgac tgccatgcag aaataatctc
2941 ccggagaggc ttcatcaggt ttctctacag tgagttaatg aaatacaact cccagactgc
3001 gaaggatagt atatttgaac ctgctaaggg aggagaaaag ctccaaaaag aacatttttc
3061 ttctgcccac tgttatcttc actttctttg tccagtcttt tgtttttaat aagcagtgac
3121 cctccctact cttcttttta atgatttttg tagttgattt gtctgaactg tggctactgt
3181 gcattccttg aataatcact tgtaaaaatt gtcagtgctt gaagctgttt cctttactca
3241 cattg
//