LOCUS       AK304133                3313 bp    mRNA    linear   HUM 24-JUL-2008
DEFINITION  Homo sapiens cDNA FLJ61059 complete cds, highly similar to Homo
            sapiens SMC5 structural maintenance of chromosomes 5-like 1
            (SMC5L1), mRNA.
ACCESSION   AK304133
VERSION     AK304133.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3313)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..3313
                     /clone="TRACH3011311"
                     /clone_lib="TRACH3"
                     /db_xref="H-InvDB:HIT000498757"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /organism="Homo sapiens"
                     /tissue_type="trachea"
     CDS             118..2307
                     /codon_start=1
                     /note="highly similar to Homo sapiens SMC5 structural
                     maintenance of chromosomes 5-like 1 (SMC5L1), mRNA"
                     /protein_id="BAG65027.1"
                     /transl_table=1
                     /translation="MATPSKKTSTPSPQPSKRALPRDPSSEVPSKRKNSAPQLPLLQS
                     SGPFVEGSIVRISMENFLTYDICEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPA
                     FMGRADKVGFFVKRGCSRGMVEIELFRASGNLVITREIDVAKNQSFWFINKKSTTQKI
                     VEEKVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHKYHCELKNL
                     REKEKQLETSCKEKTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYE
                     NVRQEYEEVKLVRDRVKEEVRKLKEGQIPITCRIEEMENERHNLEARIKEKATDIKEA
                     SQKCKQKQDVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTEN
                     CENLQPQIDAITNDLRRIQDEKALCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMN
                     QKEDKLRQRFRDTYDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSND
                     LRAFVFESQEDMEVFLKEVRDNKKLRVNAVIAPKSSYADKAPSRSLNELKQYGFFSYL
                     RELFDAPDPVMSYLCCQYHIHEVPVGTEKTRERIERVIQETRLKQIYTAEEKYVVKTS
                     FYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEIHRKLQAVDSGLIALRETSKH
                     LEHKDNELRQKKKELLERKTKKRQLEQIRIRLYGRIFTTPSYRATFH"
BASE COUNT         1182 a          577 c          750 g          804 t
ORIGIN      
        1 ggtaacagtt cgcggcagtt cgcgcgggag cggggcgcct gggtggatgg gcgcttgggc
       61 gcctgggctg ccggacggtg ggaacggaag tcgctgtggg acgctgagga agccaggatg
      121 gcgactccga gcaagaagac gtcaactcca agcccccagc cttccaagag agctctcccg
      181 agagaccctt cgtcggaggt cccgagcaag aggaagaatt cggccccgca gctgccgctg
      241 ttgcagtcgt ccgggccttt cgtggaaggc tctatcgtcc gcatctcgat ggagaacttc
      301 ctaacatatg atatttgtga agtatctcct ggaccccact tgaatatgat cgttggagcc
      361 aatggaacag ggaagtcgag cattgtgtgt gccatttgcc ttggtttagc tggaaaacct
      421 gctttcatgg gacgagcaga taaggttggg ttttttgtga agagaggatg ttctagaggc
      481 atggttgaaa ttgaattgtt cagggcttct ggaaatcttg taatcacccg tgagattgat
      541 gtggcaaaaa atcagtcctt ttggttcatc aacaaaaaat ctacaaccca gaaaatagtg
      601 gaagagaaag ttgcagcctt aaatattcaa gtggggaatc tttgccagtt tctccctcag
      661 gacaaagttg gagaatttgc taaactcagc aaaattgaac tcctcgaagc cactgaaaag
      721 tcaattggtc ccccagaaat gcacaaatat cactgtgaac tcaaaaactt aagggagaaa
      781 gaaaaacagc tcgagacctc atgcaaagag aaaactgagt atctacagaa aatggttcag
      841 aggaatgaaa gatataaaca agatgtggag aggttctatg aacggaagcg acatttagat
      901 ttaattgaga tgcttgaagc aaaaaggcca tgggtggaat atgaaaatgt tcgtcaggaa
      961 tatgaagaag taaaactagt tcgtgaccga gtgaaggaag aggtcagaaa acttaaagaa
     1021 gggcagattc ctataacatg tcgaattgaa gaaatggaaa acgagcgtca caatttggag
     1081 gctcgaatca aagaaaaggc aacagatatt aaggaggcat ctcaaaaatg caaacagaag
     1141 caagatgtta tagaaaggaa agataaacat attgaggaac ttcagcaggc tttaatagta
     1201 aagcaaaatg aagagcttga ccgacagagg agaataggta atacccgcaa aatgatagag
     1261 gatttgcaaa atgaactaaa gaccacggaa aactgcgaga atcttcagcc ccagattgat
     1321 gccattacaa atgatctgag acggattcag gatgaaaagg cattatgtga aggcgaaata
     1381 attgataagc gaagagagag ggaaactcta gagaaggaga aaaagagtgt ggacgatcat
     1441 attgtacgtt ttgacaatct tatgaatcag aaggaagata agctaagaca gagattccgt
     1501 gacacgtatg atgctgtttt atggctaaga aataacagag acaaatttaa acaaagagtc
     1561 tgtgagccca taatgctcac gatcaatatg aaagataata aaaatgccaa atatattgaa
     1621 aatcatattc catcaaatga cttaagagcc tttgtatttg aaagtcaaga agatatggag
     1681 gttttcctca aagaggttcg tgacaataaa aaattaagag taaatgctgt tattgctccc
     1741 aagagttcat atgcagacaa agcaccttca agatctttga atgaacttaa acaatacgga
     1801 tttttctctt atttgagaga attatttgat gcacctgatc ctgtaatgag ttacctttgc
     1861 tgtcagtatc atattcatga agttcctgta ggaactgaaa agaccagaga aagaattgaa
     1921 cgggtaatac aagaaacccg attaaaacag atttatacag cagaagaaaa gtatgtggtg
     1981 aaaacttctt tttattcaaa caaagttatt tctagtaaca catctctaaa agtagcgcag
     2041 tttctcactg tcactgtgga cctagagcag agaagacact tagaagaaca gctaaaggaa
     2101 attcatagaa aattgcaagc agtggattca gggttgattg ccttacgtga aacaagcaaa
     2161 catctggagc acaaagacaa tgaacttaga caaaagaaga aggagcttct tgagagaaaa
     2221 accaagaaaa gacaactgga acaaattaga atcagattat atggccgcat cttcacaact
     2281 ccgtcttaca gagcaacatt tcattgaatt ggatgaaaat agacagagat tattgcagaa
     2341 atgcaaggaa cttatgaaaa gagctaggca agtatgtaac ctgggtgcag agcagactct
     2401 tcctcaagaa taccagacaa ttctggaccc attctaccaa ttcagcaagt acccaccatt
     2461 ccaaatggac acaactcctc actccccatg gttttccaag accttccaaa cacattggat
     2521 gaaattgatg ctttattaac tgaagaaaga tcaagagctt cctgcttcac gggactgaat
     2581 cctacaattg ttcaggaata tacaaaaaga gaagaagaaa tagaacagtt aactgaggaa
     2641 ctaaagggaa agaaagttga actagatcaa tacagggaaa acatttcaca ggtaaaagaa
     2701 aggtggctta atcctttaaa agagctggta gaaaaaatta atgaaaaatt cagcaatttt
     2761 tttagttcca tgcagtgtgc tggtgaagtt gatctccata cagaaaatga ggaagattat
     2821 gataaatatg gaattcgaat tagagtcaaa tttcgaagta gtactcaact gcatgaatta
     2881 actcctcatc atcaaagtgg aggtgaaaga agtgtttcta ccatgttata cttgatggca
     2941 cttcaggagc taaatagatg tccattcaga gtagttgatg aaatcaatca gggaatggac
     3001 ccaatcaatg aacggagagt gtttgaaatg gttgtaaata ctgcctgtaa agaaaataca
     3061 tctcaatact ttttcataac accaaagctc ctgcaaaatc ttccttattc tgaaaagatg
     3121 acagttttgt ttgtctacaa tggccctcat atgctggaac caaacacatg gaatttaaag
     3181 gctttccaaa ggcggcggcg ccgtattaca ttcactcaac cttcttaata aaagtaaaga
     3241 gagggaactt gggaattttt tttgttaaat tctgtttata agtatggctc aactgaataa
     3301 aaggagattc act
//