LOCUS AK304133 3313 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61059 complete cds, highly similar to Homo sapiens SMC5 structural maintenance of chromosomes 5-like 1 (SMC5L1), mRNA. ACCESSION AK304133 VERSION AK304133.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3313) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3313 /clone="TRACH3011311" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000498757" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 118..2307 /codon_start=1 /note="highly similar to Homo sapiens SMC5 structural maintenance of chromosomes 5-like 1 (SMC5L1), mRNA" /protein_id="BAG65027.1" /transl_table=1 /translation="MATPSKKTSTPSPQPSKRALPRDPSSEVPSKRKNSAPQLPLLQS SGPFVEGSIVRISMENFLTYDICEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPA FMGRADKVGFFVKRGCSRGMVEIELFRASGNLVITREIDVAKNQSFWFINKKSTTQKI VEEKVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHKYHCELKNL REKEKQLETSCKEKTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYE NVRQEYEEVKLVRDRVKEEVRKLKEGQIPITCRIEEMENERHNLEARIKEKATDIKEA SQKCKQKQDVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTEN CENLQPQIDAITNDLRRIQDEKALCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMN QKEDKLRQRFRDTYDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSND LRAFVFESQEDMEVFLKEVRDNKKLRVNAVIAPKSSYADKAPSRSLNELKQYGFFSYL RELFDAPDPVMSYLCCQYHIHEVPVGTEKTRERIERVIQETRLKQIYTAEEKYVVKTS FYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEIHRKLQAVDSGLIALRETSKH LEHKDNELRQKKKELLERKTKKRQLEQIRIRLYGRIFTTPSYRATFH" BASE COUNT 1182 a 577 c 750 g 804 t ORIGIN 1 ggtaacagtt cgcggcagtt cgcgcgggag cggggcgcct gggtggatgg gcgcttgggc 61 gcctgggctg ccggacggtg ggaacggaag tcgctgtggg acgctgagga agccaggatg 121 gcgactccga gcaagaagac gtcaactcca agcccccagc cttccaagag agctctcccg 181 agagaccctt cgtcggaggt cccgagcaag aggaagaatt cggccccgca gctgccgctg 241 ttgcagtcgt ccgggccttt cgtggaaggc tctatcgtcc gcatctcgat ggagaacttc 301 ctaacatatg atatttgtga agtatctcct ggaccccact tgaatatgat cgttggagcc 361 aatggaacag ggaagtcgag cattgtgtgt gccatttgcc ttggtttagc tggaaaacct 421 gctttcatgg gacgagcaga taaggttggg ttttttgtga agagaggatg ttctagaggc 481 atggttgaaa ttgaattgtt cagggcttct ggaaatcttg taatcacccg tgagattgat 541 gtggcaaaaa atcagtcctt ttggttcatc aacaaaaaat ctacaaccca gaaaatagtg 601 gaagagaaag ttgcagcctt aaatattcaa gtggggaatc tttgccagtt tctccctcag 661 gacaaagttg gagaatttgc taaactcagc aaaattgaac tcctcgaagc cactgaaaag 721 tcaattggtc ccccagaaat gcacaaatat cactgtgaac tcaaaaactt aagggagaaa 781 gaaaaacagc tcgagacctc atgcaaagag aaaactgagt atctacagaa aatggttcag 841 aggaatgaaa gatataaaca agatgtggag aggttctatg aacggaagcg acatttagat 901 ttaattgaga tgcttgaagc aaaaaggcca tgggtggaat atgaaaatgt tcgtcaggaa 961 tatgaagaag taaaactagt tcgtgaccga gtgaaggaag aggtcagaaa acttaaagaa 1021 gggcagattc ctataacatg tcgaattgaa gaaatggaaa acgagcgtca caatttggag 1081 gctcgaatca aagaaaaggc aacagatatt aaggaggcat ctcaaaaatg caaacagaag 1141 caagatgtta tagaaaggaa agataaacat attgaggaac ttcagcaggc tttaatagta 1201 aagcaaaatg aagagcttga ccgacagagg agaataggta atacccgcaa aatgatagag 1261 gatttgcaaa atgaactaaa gaccacggaa aactgcgaga atcttcagcc ccagattgat 1321 gccattacaa atgatctgag acggattcag gatgaaaagg cattatgtga aggcgaaata 1381 attgataagc gaagagagag ggaaactcta gagaaggaga aaaagagtgt ggacgatcat 1441 attgtacgtt ttgacaatct tatgaatcag aaggaagata agctaagaca gagattccgt 1501 gacacgtatg atgctgtttt atggctaaga aataacagag acaaatttaa acaaagagtc 1561 tgtgagccca taatgctcac gatcaatatg aaagataata aaaatgccaa atatattgaa 1621 aatcatattc catcaaatga cttaagagcc tttgtatttg aaagtcaaga agatatggag 1681 gttttcctca aagaggttcg tgacaataaa aaattaagag taaatgctgt tattgctccc 1741 aagagttcat atgcagacaa agcaccttca agatctttga atgaacttaa acaatacgga 1801 tttttctctt atttgagaga attatttgat gcacctgatc ctgtaatgag ttacctttgc 1861 tgtcagtatc atattcatga agttcctgta ggaactgaaa agaccagaga aagaattgaa 1921 cgggtaatac aagaaacccg attaaaacag atttatacag cagaagaaaa gtatgtggtg 1981 aaaacttctt tttattcaaa caaagttatt tctagtaaca catctctaaa agtagcgcag 2041 tttctcactg tcactgtgga cctagagcag agaagacact tagaagaaca gctaaaggaa 2101 attcatagaa aattgcaagc agtggattca gggttgattg ccttacgtga aacaagcaaa 2161 catctggagc acaaagacaa tgaacttaga caaaagaaga aggagcttct tgagagaaaa 2221 accaagaaaa gacaactgga acaaattaga atcagattat atggccgcat cttcacaact 2281 ccgtcttaca gagcaacatt tcattgaatt ggatgaaaat agacagagat tattgcagaa 2341 atgcaaggaa cttatgaaaa gagctaggca agtatgtaac ctgggtgcag agcagactct 2401 tcctcaagaa taccagacaa ttctggaccc attctaccaa ttcagcaagt acccaccatt 2461 ccaaatggac acaactcctc actccccatg gttttccaag accttccaaa cacattggat 2521 gaaattgatg ctttattaac tgaagaaaga tcaagagctt cctgcttcac gggactgaat 2581 cctacaattg ttcaggaata tacaaaaaga gaagaagaaa tagaacagtt aactgaggaa 2641 ctaaagggaa agaaagttga actagatcaa tacagggaaa acatttcaca ggtaaaagaa 2701 aggtggctta atcctttaaa agagctggta gaaaaaatta atgaaaaatt cagcaatttt 2761 tttagttcca tgcagtgtgc tggtgaagtt gatctccata cagaaaatga ggaagattat 2821 gataaatatg gaattcgaat tagagtcaaa tttcgaagta gtactcaact gcatgaatta 2881 actcctcatc atcaaagtgg aggtgaaaga agtgtttcta ccatgttata cttgatggca 2941 cttcaggagc taaatagatg tccattcaga gtagttgatg aaatcaatca gggaatggac 3001 ccaatcaatg aacggagagt gtttgaaatg gttgtaaata ctgcctgtaa agaaaataca 3061 tctcaatact ttttcataac accaaagctc ctgcaaaatc ttccttattc tgaaaagatg 3121 acagttttgt ttgtctacaa tggccctcat atgctggaac caaacacatg gaatttaaag 3181 gctttccaaa ggcggcggcg ccgtattaca ttcactcaac cttcttaata aaagtaaaga 3241 gagggaactt gggaattttt tttgttaaat tctgtttata agtatggctc aactgaataa 3301 aaggagattc act //