LOCUS AK304098 3211 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54486 partial cds.
ACCESSION AK304098
VERSION AK304098.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3211)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3211
/clone="TRACH3008438"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498722"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 350..>3211
/codon_start=1
/protein_id="BAH14103.1"
/transl_table=1
/translation="MRSKGRARKLATNNECVYGNYPEIPLEEMPDADGVASTPSLNIQ
EPCSPATSSEAFTPKEGSPYKAPIYIPDDIPIPAEFELRESNMPGAGLGIWTKRKIEV
GEKFGPYVGEQRSNLKDPSYGWEILDEFYNVKFCIDASQPDVGSWLKYIRFAGCYDQH
NLVACQINDQIFYRVVADIAPGEELLLFMKSEDYPHETMAPDIHEERQYRCEDCDQLF
ESKAELADHQKFPCSTPHSAFSMVEEDFQQKLESENDLQEIHTIQECKECDQVFPDLQ
SLEKHMLSHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKVFTDPSNL
QRHIRSQHVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLC
RHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQGISLPGTPA
MDKTSMVNMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPA
SSPVKGLSSTEQTNKSQSPLMTHPQILPATQDILKALSKHPSVGDNKPVELQPERSSE
ERPFEKISDQSESSDLDDVSTPSGSDLETTSGSDLESDIESDKEKFKENGKMFKDKVS
PLQNLASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQ
DKKVGALPYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKMEPQSPGEVKKLQKGSSES
PFDLTTKRKDEKPLTPVPSKPPVTPATSQDQPLDLSMGSRSRASGTKLTEPRKNHVFG
GKKGSNVESRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPSPGFLF
HPQFQLPDQRTWMSAIENMAEKLESFSALKPEASELLQSVPSMFNFRAPPNALPENLL
RKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQLKNKDLQ"
BASE COUNT 989 a 725 c 785 g 712 t
ORIGIN
1 tttttttggc ggcgctgaga tgttggaggg gcgtctagcg cgcatgtgcg aaggtgtcca
61 aactgacaat gctggagaga tagcgagtgt ggattgagag aaagggagag agggagggag
121 agagagtgaa agaagaaaat acagagagtg agtgtgtgga agagagagag aaacaggaga
181 gaaacaggag ggagggagag agagagagag agagagagag agagagagag agagagagag
241 agagagacag gagagagagg gagggagcga gagggagagc aaaagaagga aaggatccaa
301 gaaaaaaaag ccccaaccac acaccagcgg ctgcaggact gggcacagca tgagatccaa
361 aggcagggca aggaaactgg ccacaaataa tgagtgtgta tatggcaact accctgaaat
421 acctttggaa gagatgccag atgcagatgg agtagccagc actccctccc tcaatattca
481 agagccatgc tctcctgcca catccagtga agcattcact ccaaaggagg gttctcctta
541 caaagccccc atctacatcc ctgatgatat ccccattcct gctgagtttg aacttcgaga
601 gtcaaatatg cctggggcag gactaggaat atggaccaaa aggaagatcg aagtaggtga
661 aaagtttggg ccttatgtgg gagagcagag gtcaaacctg aaagacccca gttatggatg
721 ggagatctta gacgaatttt acaatgtgaa gttctgcata gatgccagtc aaccagatgt
781 tggaagctgg ctcaagtaca ttagattcgc tggctgttat gatcagcaca accttgttgc
841 atgccagata aatgatcaga tattctatag agtagttgca gacattgcgc cgggagagga
901 gcttctgctg ttcatgaaga gcgaagacta tccccatgaa actatggcgc cggatatcca
961 cgaagaacgg caatatcgct gcgaagactg tgaccagctc tttgaatcta aggctgaact
1021 agcagatcac caaaagtttc catgcagtac tcctcactca gcattttcaa tggttgaaga
1081 ggactttcag caaaaactcg aaagcgagaa tgatctccaa gagatacaca cgatccagga
1141 gtgtaaggaa tgtgaccaag tttttcctga tttgcaaagc ctggagaaac acatgctgtc
1201 acatactgaa gagagggaat acaagtgtga tcagtgtccc aaggcattta actggaagtc
1261 caatttaatt cgccaccaga tgtcacatga cagtggaaag cactatgaat gtgaaaactg
1321 tgccaaggtt ttcacggacc ctagcaacct tcagcggcac attcgctctc agcatgtcgg
1381 tgcccgggcc catgcatgcc cggagtgtgg caaaacgttt gccacttcgt cgggcctcaa
1441 acaacacaag cacatccaca gcagtgtgaa gccctttatc tgtgaggtct gccataaatc
1501 ctatactcag ttttcaaacc tttgccgtca taagcgcatg catgctgatt gcagaaccca
1561 aatcaagtgc aaagactgtg gacaaatgtt cagcactacg tcttccttaa ataaacacag
1621 gaggttttgt gagggcaaga accattttgc ggcaggtgga ttttttggcc aaggcatttc
1681 acttcctgga accccagcta tggataaaac gtccatggtt aatatgagtc atgccaaccc
1741 gggccttgct gactattttg gcgccaatag gcatcctgct ggtcttacct ttccaacagc
1801 tcctggattt tcttttagct tccctggtct gtttccttcc ggcttgtacc acaggcctcc
1861 tttgatacct gctagttctc ctgttaaagg actatcaagt actgaacaga caaacaaaag
1921 tcaaagtccc ctcatgacac atcctcagat actgccagct acacaggata ttttgaaggc
1981 actatctaaa cacccatctg taggggacaa taagccagtg gagctccagc ccgagaggtc
2041 ctctgaagag aggccctttg agaaaatcag tgaccagtca gagagtagtg accttgatga
2101 tgtcagtaca ccaagtggca gtgacctgga aacaacctcg ggctctgatc tggaaagtga
2161 cattgaaagt gataaagaga aatttaaaga aaatggtaaa atgttcaaag acaaagtaag
2221 ccctcttcag aatctggctt caataaataa taagaaagaa tacagcaatc attccatttt
2281 ctcaccatct ttagaggagc agactgcggt gtcaggagct gtgaatgatt ctataaaggc
2341 tattgcttct attgctgaaa aatactttgg ttcaacagga ctggtggggc tgcaagacaa
2401 aaaagttgga gctttacctt acccttccat gtttcccctc ccattttttc cagcattctc
2461 tcaatcaatg tacccatttc ctgatagaga cttgagatcg ttacctttga aaatggaacc
2521 ccaatcacca ggtgaagtaa agaaactgca gaagggcagc tctgagtccc cctttgatct
2581 caccactaag cgaaaggatg agaagccctt gactccagtc ccctccaagc ctccagtgac
2641 acctgccaca agccaagacc agcccctgga tctaagtatg ggcagtagga gtagagccag
2701 tgggacaaag ctgactgagc ctcgaaaaaa ccacgtgttt gggggaaaaa aaggaagcaa
2761 cgtcgaatca agacctgctt cagatggttc cttgcagcat gcaagaccca ctcctttctt
2821 tatggaccct atttacagag tagagaaaag aaaactaact gacccacttg aagctttaaa
2881 agagaaatac ttgaggcctt ctccaggatt cttgtttcac ccacaattcc aactgcctga
2941 tcagagaact tggatgtcag ctattgaaaa catggcagaa aagctagaga gcttcagtgc
3001 cctgaaacct gaggccagtg agctcttaca gtcagtgccc tctatgttca acttcagggc
3061 gcctcccaat gccctgccag agaaccttct gcggaaggga aaggagcgct atacctgcag
3121 atactgtggc aagatttttc caaggtctgc aaacctaaca cggcacttga gaacccacac
3181 aggagagcaa ctaaaaaata aagacttaca a
//