LOCUS AK304060 3796 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61651 complete cds, highly similar to Protein
transport protein Sec24A.
ACCESSION AK304060
VERSION AK304060.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3796)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3796
/clone="TRACH3005563"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498684"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 990..3563
/codon_start=1
/note="highly similar to Protein transport protein Sec24A"
/protein_id="BAG64967.1"
/transl_table=1
/translation="MYPSPYLIQLSTKKVLHQIPITDLWWSTVVTTRLKEVAYWLTNK
NPKMSRSVGYSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTSM
SGLSLQPEGLRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQT
QALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNL
CYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDV
SHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQESLSQPQMLIV
SDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLMS
PTGGRMSVFQTQLPTLGVGALKPREEPNHRSSAKDIHMTPSTDFYKKLALDCSGQQVA
VDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIG
FEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVS
FQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASL
SDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQTGTNA
RLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVE
KLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESAR
IIAFISWLREQRPFFPILYVIRDESPMKANFLQNMIEDRTESALSYYEFLLHIQQQVN
K"
BASE COUNT 1009 a 975 c 749 g 1063 t
ORIGIN
1 acttccggcc agggcctccc tccttctctc taggtttggc tgccgccttc tagccgggcg
61 ttcgctgccc cgccggcccg actctcaagc ctcagctccc aggctaggct gtggccgccg
121 gtggcctggg gagagtgcgg cgccatgcct cgggcttaat gcgccccccc ctcttctccc
181 agtcttcagt cttaggtcgt tagcctcctc cctccgcttt cagcagtggt ctttcagctc
241 tcttcttgtg cgctgttgtc gaccccgacc agccccttcc aacccagtca tcatgtccca
301 gccgggaata ccggcctccg gcggcgcccc agccagcctc caggcccaga acggagccgc
361 cttggcctcg gggtctccct acaccaacgg tcctgtccaa aatgcattgc tgtcttcaca
421 agagtcagtg agccaaggat acaatttcca gcttccagga tcctaccctc atccaatacc
481 agcaaagact ttgaatccag tctctggaca gtctaactat ggtggttctc agggatctgg
541 gcagactctt aatagaccac ctgtggcctc taatccagtg acaccttcgc ttcatagcgg
601 tcctgctccc cgaatgccat tacctgcttc tcagaaccca gctactacac caatgccttc
661 tagtagcttt cttcctgaag ccagcctgcc accacctttg aattggcaat ataactatcc
721 atccacagcc tcacaaacaa accattgtcc tcgtgcatca tcccaaccaa ctgtatctgg
781 aaatacaagt ttaaccacaa atcatcaata tgtttcttct ggatatcctt cacttcaaaa
841 tagcttcata aagtcaggtc cttctgtacc tcccttagtg aatccacctc tgcctacaac
901 ttttcaacca ggagctcctc atgggccccc tccagctgga ggcccacccc cagtgagggc
961 cctcacgccc ctgacatcat catatagaga tgtaccccag cccttattta attcagctgt
1021 caaccaagaa ggtattacat caaataccaa taacggatct atggtggtcc acagtagtta
1081 cgacgagatt gaaggaggtg gcttactggc ttactaacaa gaatcccaaa atgagccgaa
1141 gtgttggata ttcatatccc tccttaccac ctggttatca gaacacaaca ccacctggtg
1201 caactggagt accaccctct tccttgaatt acccaagtgg gccacaagcc tttactcaga
1261 ctcccttagg tgctaatcat ttaaccacaa gcatgagtgg attaagtcta caaccagagg
1321 gtctaagagt tgtcaatctt cttcaagaaa gaaacatgct tccgtcaaca cctttgaagc
1381 ctccagttcc aaatttgcat gaagacatcc agaaactcaa ctgtaaccca gagttatttc
1441 gatgcacgct gactagcatt cctcagacgc aggccttatt gaataaagcc aaacttcctt
1501 tggggctgct gcttcatcct ttcaaagact tagtgcaatt gcctgtggtt acctccagta
1561 caattgtgag atgccgttca tgcaggacgt acatcaatcc tttcgtcagc tttcttgatc
1621 aaaggagatg gaagtgtaac ttatgttatc gagtcaatga tgttcctgaa gaattcttgt
1681 acaacccttt gaccagagtt tatggagaac ctcacagaag accagaagtt caaaatgcta
1741 ctattgagtt tatggctcct tcagaataca tgttacgacc acctcagcct ccagtgtatc
1801 tctttgtatt tgatgtgtct cacaatgcag tcgaaactgg atacttgaat tcagtttgcc
1861 agagtttgtt agacaatctg gatttgcttc ctggcaacac tagaacaaaa attggcttca
1921 taacatttga cagtacaatc catttctacg gtcttcagga aagtctctct caacctcaga
1981 tgctaatagt ttcagatatt gaagatgttt ttatacctat gccagagaac ttattagtaa
2041 acttaaatga aagtaaagag ctcgtgcaag atttactgaa aactttgcca caaatgttta
2101 ccaagactct ggagacccag agtgccttgg gtcctgcact gcaggctgcc tttaagctga
2161 tgtctccaac tggtggtcga atgtctgtct ttcaaacaca actcccaact cttggagtgg
2221 gagccctgaa accacgagag gaaccaaacc acaggtcatc tgctaaggat atacacatga
2281 caccatccac tgacttctat aagaaattag ccttggactg ttctggtcag caagttgctg
2341 ttgacttatt ccttctcagt ggacagtatt ctgatttggc ttctctgggt tgtatttctc
2401 ggtattcagc aggtagtgtc tattactatc cctcttacca tcatcagcac aacccagtcc
2461 aagtacagaa attacagaag gaactacaga gataccttac tcggaagatt ggctttgagg
2521 cagtcatgag gattcggtgc accaaaggtc tttccattca tactttccat ggaaacttct
2581 ttgttaggtc aaccgactta ctgtctttgc ctaacgtcaa cccagacgct gggtatgcag
2641 tacagatgtc agtggaagag agtcttactg acactcagtt ggtttctttt cagtcagcac
2701 tcttgtatac atccagcaaa ggcgaaagaa gaattcgtgt tcatactttg tgtttgccag
2761 tagtttcgac tctgaatgat gtctttcttg gagctgatgt tcaagcaatt tcagggttat
2821 tggccaatat ggctgttgac agatctatga ctgccagtct gagtgacgct cgggatgctc
2881 tagtgaatgc agtcattgac tccctttcag cttaccgttc ttcagtctta agtaaccagc
2941 agcctggact catggttcct ttttctttgc ggcttttccc actttttgtg ttggctctcc
3001 ttaaacagaa atcattccag actgggacaa atgcacgtct agatgaacgc atttttgcta
3061 tgtgtcaagt gaaaaaccag cccttggttt accttatgct cacaactcat cccagtttgt
3121 atagagttga caatctctca gatgagggag cactcaacat cagtgataga accatacctc
3181 agccccccat tcttcagctt tcagtggaga agctgagcag agatggagct ttcctcatgg
3241 atgcaggctc tgtactgatg ctttgggttg gaaaaaattg tacacagaat tttctcagcc
3301 aagttctagg agttcaaaac tatgcatcaa ttccacagcc tatgacagac cttccagaac
3361 ttgatacacc agaatctgcc agaataatag ctttcatctc ttggcttaga gagcagagac
3421 catttttccc aatactttat gtaataaggg atgagagtcc aatgaaagca aacttccttc
3481 aaaacatgat agaagacaga acagaatctg cattatcata ttatgaattc ctgttgcata
3541 tacagcaaca agtgaataaa tgaatgaatg aagaaatttg acttattttt aaggaatgtc
3601 acgatagtgc agaatacctg gaaatgtgta ataccttctt tttctattat gtttgtggac
3661 taatgtgatg attgagatgt tctcactgtg atttcaacaa cctatagcaa ataaaagacc
3721 acagcagaga atcaaacatg caactctgaa atactgtatt tttcaaatca gaatatagct
3781 acgtatgatt ggatac
//