LOCUS AK304047 1102 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54952 complete cds, highly similar to
Spindlin-1.
ACCESSION AK304047
VERSION AK304047.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1102)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1102
/clone="TRACH3004467"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498671"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 280..1056
/codon_start=1
/note="highly similar to Spindlin-1"
/protein_id="BAH14098.1"
/transl_table=1
/translation="MKTAFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQ
PRGNIVGCRIQHGWKDGDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDE
RVSSLEVLPNRVASSRISDTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNT
WFYITYEKDPVLYMYQLLDDYKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAK
DDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS"
BASE COUNT 301 a 259 c 292 g 250 t
ORIGIN
1 agtgggagtc cgatgtggga gaggggctgc ggccaccgcc accgccgccg ccaccaggaa
61 ggcggaggac gcaggagcca agagcaaggg acgccgccac ggtcatcttc gcctgccccg
121 ccgccctctt agagacactc attgcctatg gatcatcctc tcccagcttt tgcaagcacc
181 gggctgctcg cccgctgatt ttcctcctcc ataggctcac tgcggaggca acggcgaggt
241 gtccgatttg tgcacttgag gcccgcaatc cgggacggca tgaagaccgc gtttggaaag
301 gcagctgcag ggcagcggtc caggacgggc gctggccacg gcagtgtgtc tgttaccatg
361 ataaagagga aggctgcaca caagaagcat aggagccgac ccacctccca gcctcggggg
421 aacatcgtgg gctgcagaat tcagcacgga tggaaagatg gagatgaacc tctaacacag
481 tggaaaggaa ccgttctgga tcaggtacct gtaaatccct ctctgtatct tatcaaatat
541 gatggatttg actgtgttta tggattggaa cttcacagag atgaaagagt gtcatcactt
601 gaagtccttc ctaatagagt tgcatcatct agaatcagtg atacacactt ggcagaaata
661 atggttggca aagcagtgga acatattttt gagacagagg aaggttccaa aaatgaatgg
721 agggggatgg tcttagctca ggcacctgtc atgaacacat ggttttacat tacctatgag
781 aaagatcctg tattatatat gtaccagctc ttagatgatt ataaagatgg tgacctccgc
841 atccttcaag attccaatga ttctcctctg gcagagaggg agccaggaga agtcatagac
901 agcctggtag gcaaacaggt ggaatacgcc aaagacgatg gctccaagag aactggcatg
961 gtcattcatc aggtagaagc aaaaccctct gtgtacttca tcaaatttga tgatgatttc
1021 catatctatg tctacgattt ggtaaaaaca tcttagaggt catcttgaaa atttgccaaa
1081 tatatgagac tctaaatctg ta
//