LOCUS AK304036 1943 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ52391 complete cds, highly similar to
Myotubularin (EC 3.1.3.48).
ACCESSION AK304036
VERSION AK304036.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1943)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1943
/clone="TRACH3003245"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498660"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 243..1493
/codon_start=1
/note="highly similar to Myotubularin (EC 3.1.3.48)"
/protein_id="BAH14097.1"
/transl_table=1
/translation="MGGATSRGENSYGLGITCKDMRNLRFALKQEGHSRRDMFEILTR
YAFPLAHSLPLFAFLNEEKFNVDGWTVYNPVEEYRRQGLPNHHWRITFINKCYELCDT
YPALLVVPYRASDDDLRRVATFRSRNRIPVLSWIHPENKTVIVRCSQPLVGMSGKRNK
DDEKYLDVIRETNKQISKLTIYDARPSVNAVANKATGGGYESDDAYHNAELFFLDIHN
IHVMRESLKKVKDIVYPNVEESHWLSSLESTHWLEHIKLVLTGAIQVADKVSSGKSSV
LVHCSDGWDRTAQLTSLAMLMLDSFYRSIEGFEILVQKEWISFGHKFASRIGHGDKNH
TDADRSPIFLQFIDCVWQMSKQFPTAFEFNEQFLIIILDHLYSCRFGTFLFNCESARE
RQALHFLSLSLCRRLQKGLFLYGH"
BASE COUNT 571 a 394 c 434 g 544 t
ORIGIN
1 agccgagcag cctggcaacg gcggtggcgc ccggagcccg agagtttcca ggatggcttc
61 tgcatcaact tctaaatata attcacactc cttggagaat gagtctatta agaggacgtc
121 tcgagatgga gtcaatcgag atctcactga ggctgttcct cgacttccag gagaaacact
181 aatcactgga ttcttctcta atacttgatg ttcctctggg tgtgatctcg agaattgaaa
241 aaatgggagg cgcgacaagt agaggagaaa attcctatgg tctaggtatt acttgtaaag
301 acatgagaaa cctgaggttc gctttgaaac aggaaggcca cagcagaaga gatatgtttg
361 agatcctcac gagatacgcg tttcccctgg ctcacagtct gccattattt gcatttttaa
421 atgaagaaaa gtttaacgtg gatggatgga cagtttacaa tccagtggaa gaatacagga
481 ggcagggctt gcccaatcac cattggagaa taacttttat taataagtgc tatgagctct
541 gtgacactta ccctgctctt ttggtggttc cgtatcgtgc ctcagatgat gacctccgga
601 gagttgcaac ttttaggtcc cgaaatcgaa ttccagtgct gtcatggatt catccagaaa
661 ataagacggt cattgtgcgt tgcagtcagc ctcttgtcgg tatgagtggg aaacgaaata
721 aagatgatga gaaatatctc gatgttatca gggagactaa taaacaaatt tctaaactca
781 ccatttatga tgcaagaccc agcgtaaatg cagtggccaa caaggcaaca ggaggaggat
841 atgaaagtga tgatgcatat cataacgccg aacttttctt cttagacatt cataatattc
901 atgttatgcg ggaatcttta aaaaaagtga aggacattgt ttatcctaat gtagaagaat
961 ctcattggtt gtccagtttg gagtctactc attggttaga acatatcaag ctcgttttga
1021 caggagccat tcaagtagca gacaaagttt cttcagggaa gagttcagtg cttgtgcatt
1081 gcagtgacgg atgggacagg actgctcagc tgacatcctt ggccatgctg atgttggata
1141 gcttctatag gagcattgaa gggttcgaaa tactggtaca aaaagaatgg ataagttttg
1201 gacataaatt tgcatctcga ataggtcatg gtgataaaaa ccacaccgat gctgaccgtt
1261 ctcctatttt tctccagttt attgattgtg tgtggcaaat gtcaaaacag ttccctacag
1321 cttttgaatt caatgaacaa tttttgatta taattttgga tcatctgtat agttgccgat
1381 ttggtacttt cttattcaac tgtgaatctg ctcgagaaag acaggctctc cactttctct
1441 ctctgtctct ctgtagaagg ttacagaaag gactgtttct ttatggtcac tgataaacag
1501 taataaagaa aaattcaaaa accccttcta tactaaagaa atcaatcgag ttttatatcc
1561 agttgccagt atgcgtcact tggaactctg ggtgaattac tacattagat ggaaccccag
1621 gatcaagcaa caacagccga atccagtgga gcagcgttac atggagctct tagccttacg
1681 cgacgaatac ataaagcggc ttgaggaact gcagctcgcc aactctgcca agctttctga
1741 tcccccaact tcaccttcca gtccttcgca aatgatgccc catgcgcaaa ctcacttctg
1801 aggggggacc ctggcaccgc attagagctc gaaataaagg cgatagctga ctttcatttg
1861 gggcatttgt aaaaagtaga ttaaaatatt tgcctccatg tagaacttga actaacataa
1921 tcttaaactc ttgaatatgt gcc
//