LOCUS AK304035 1623 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59653 complete cds, highly similar to
Lipoma-preferred partner.
ACCESSION AK304035
VERSION AK304035.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1623)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1623
/clone="TRACH3003184"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498659"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 101..1498
/codon_start=1
/note="highly similar to Lipoma-preferred partner"
/protein_id="BAH14096.1"
/transl_table=1
/translation="MSHPSWLPPKSTGEPLGHVPARMETTHSFGNPSISVSTQQPPKK
FAPVVAPKPKYNPYKQPGGEGDFLPPPPPPLDDSSALPSISGNFPPPPPLDEEAFKVQ
GNPGGKTLEERRSSLDAEIDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTG
HKRMVIPNQPPLTATKKSTLKPQPAPQAGPIPVAPIGTLKPQPQPVPASYTTASTSSR
PTFNVQGGHSGQLGPSSVAPSFRPEDELEHLTKKMLYDMENPPADEYFGRCARCGENV
VGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQCNVCSK
PIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVC
KEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHILCKTCN
SARIRVLTAKASTDL"
BASE COUNT 386 a 490 c 383 g 364 t
ORIGIN
1 actttttgtc tgtgggttcg ttcccgggtc ccgcgcgagc tttcccggga taagtagctt
61 tagcgatcgg gagacagccg ggcgctgcaa gattccaaca atgtctcacc catcttggct
121 gccacccaaa agcactggtg agcccctcgg ccatgtgcct gcacggatgg agaccaccca
181 ttcctttggg aaccccagca tttcagtgtc tacacaacag ccacccaaaa agtttgcccc
241 ggtagttgct ccaaaaccta agtacaaccc atacaaacaa cctggaggtg agggtgattt
301 tcttccaccc ccacctccac ctctagatga ttccagtgcc cttccatcta tctctggaaa
361 ctttcctcct ccaccacctc ttgatgaaga ggctttcaaa gtacagggga atcccggagg
421 caagacactt gaggagaggc gctccagcct ggacgctgag attgactcct tgaccagcat
481 cttggctgac cttgagtgca gctcccccta taagcctcgg cctccacaga gctccactgg
541 ttcaacagcc tctcctccag tttcgacccc agtcacagga cacaagagaa tggtcatccc
601 gaaccaaccc cctctaacag caaccaagaa gtctacattg aaaccacagc ctgcacccca
661 ggctggaccc atccctgtgg ctccaatcgg aacactcaaa ccccagcctc agccagtccc
721 agcctcctac accacggcct ccacttcttc aaggcctacc tttaatgtgc agggtggcca
781 ttcagggcaa ctggggcctt cgtcagttgc cccttcattc cgcccagagg atgagcttga
841 gcacctgacc aaaaagatgc tgtatgacat ggaaaatcca cctgctgacg aatactttgg
901 ccgctgtgct cgctgtggag aaaacgtagt tggggaaggt acaggatgca ctgccatgga
961 tcaggtcttc cacgtggatt gttttacctg catcatctgc aacaacaagc tccgagggca
1021 gccattctat gctgtggaaa agaaagcata ctgcgagccc tgctacatta atactctgga
1081 gcagtgcaat gtgtgttcca agcccatcat ggagcggatt ctccgagcca ccgggaaggc
1141 ctatcatcct cactgtttca cctgcgtgat gtgccaccgc agcctggatg ggatcccatt
1201 cactgtggat gctggcgggc tcattcactg cattgaggac ttccacaaga aatttgcccc
1261 gcggtgttct gtgtgcaagg agcctattat gccagccccg ggccaggagg agactgtccg
1321 tattgtggct ttggatcgag atttccatgt tcactgctac cgatgcgagg attgcggtgg
1381 tctcctgtct gaaggagata accaaggctg ctaccccttg gatgggcaca tcctctgcaa
1441 gacctgcaac tctgcccgca tcagggtgtt gaccgccaag gcgagcactg acctttagat
1501 tcagtcacct gttcagccgg cactgagaag aacgaacaca agaaaaagat aagaaatact
1561 agagtaaagg ccatcaaact acgcgatagt ctctgttctt catctgctat taaccttgcc
1621 tta
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