LOCUS AK303981 1880 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58665 complete cds, highly similar to
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit
B alpha isoform.
ACCESSION AK303981
VERSION AK303981.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1880)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1880
/clone="TRACH2023082"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000498605"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 34..1407
/codon_start=1
/note="highly similar to Serine/threonine-protein
phosphatase 2A 55 kDa regulatory subunit B alpha isoform"
/protein_id="BAG64899.1"
/transl_table=1
/translation="MFPKFSLRSMFHGAGGGNDIQWCFSQVKGAVDDDVAEADIISTV
EFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEI
EEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVT
TLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLWHLEIT
DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS
KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKIWDLNMENRPVETYQ
VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEAS
RENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLY
IFQDKVN"
BASE COUNT 598 a 350 c 389 g 543 t
ORIGIN
1 atatatgaat cattactcct tacccaggca gtaatgttcc cgaagttttc tcttcgttct
61 atgtttcatg gagctggagg agggaatgat attcagtggt gtttttctca ggtgaaagga
121 gcagtagatg atgatgtagc agaagcagat ataatttcta cagtagaatt taatcattct
181 ggagaattac tagcaacagg agataaaggt ggtagagttg tcatctttca acaggagcag
241 gagaacaaaa tccagtctca tagcagagga gaatataatg tttacagcac cttccagagc
301 catgaaccag agtttgacta cttgaaaagt ttagaaatag aagaaaagat caacaaaatt
361 aggtggttac cccagaaaaa tgctgctcag tttttattgt ctaccaatga taaaacaata
421 aaattatgga aaatcagtga aagggacaaa agaccagaag ggtataactt gaaagaggag
481 gatggaaggt atagagatcc tactacagtt actacactac gagtgccagt ctttaggcct
541 atggatctaa tggttgaggc cagtccacga agaatatttg ccaatgctca tacatatcac
601 atcaactcaa tttctattaa tagtgattat gaaacatatt tatctgcaga tgatttgcgg
661 attaatcttt ggcatctgga aattacagac aggagtttta acattgtgga tatcaagcct
721 gccaatatgg aagagctaac agaggtgatt acagcagcag aatttcatcc aaacagctgt
781 aacacatttg tatacagcag cagtaaagga actattcggc tatgtgacat gagggcatct
841 gccctctgtg atagacattc taaattgttt gaagaacctg aagatcccag taacaggtca
901 tttttttccg aaatcatctc ctctatttcg gatgtaaaat tcagccatag tggtcgatat
961 atgatgacta gagactattt gtcagtcaaa atttgggact taaatatgga aaacaggcct
1021 gtggaaacat accaggtgca tgaatacctc agaagtaaac tctgttcact gtatgaaaat
1081 gactgcatat ttgacaaatt tgaatgttgt tggaatggat ctgacagtgt tgtcatgact
1141 ggatcttaca ataatttctt cagaatgttt gacagaaaca caaagcgaga cataacccta
1201 gaagcatcgc gggaaaacaa taagcctcgc acagttctga agcctcgcaa agtctgtgca
1261 agtggcaagc gaaagaaaga tgaaataagt gttgacagcc tagacttcaa taagaaaatc
1321 cttcacacag cctggcaccc caaggaaaat atcattgccg tagctactac aaacaatctg
1381 tatatatttc aagacaaagt gaattagggt tggcattcct agcagaagaa cccacttcct
1441 gcttagttga gatagttgaa tctagcattc gttcctataa aagagagagg tccattgtgg
1501 cgcccctttc cagtgtttga cagtgtgcca ttcgacaaca cattgttata gctacatgga
1561 gaaagctctg tggattcatc actgtggtgt tctccatgtc tgctagccat ttaggtaagg
1621 gtagggcact tttaatttaa atgacttctt gcaccatctt gcctaatgga ctagattgga
1681 ctgtatcaac attgatttac tccacttttt atgccttcca ttgtgatgac gtcaaacaca
1741 gtgaaagcct tcagtcatgc tatgggattt aattgtgtat cctcattact gtatcatttg
1801 tggggtacac cccttccccc tttttttaaa ttaaatacag ctcattctta ctgtggcttg
1861 tagcattcct cctcttctgg
//