LOCUS AK303978 1421 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55764 complete cds, highly similar to
Apolipoprotein-L2.
ACCESSION AK303978
VERSION AK303978.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1421)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1421
/clone="TRACH2022662"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000498602"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 10..1359
/codon_start=1
/note="highly similar to Apolipoprotein-L2"
/protein_id="BAG64897.1"
/transl_table=1
/translation="MHSWTWDPHSSEQLDLAQSLSEEDPLSSLRGSIQPQPPAEAPDK
GGSQANNDPGGWDPGCSSSQVLGRTRGPCLGVRVREEEAGTRVKENLPVWTVTGELQG
KPLGNPAAGTMNPESSIFIEDYLKYFQDQVSRENLLQLLTDDEAWNGFVAAAELPRDE
ADELRKALNKLASHMVTKDKNRHDKDQQHRQWFLKEFPRLKRELEDHIRKLRALAEEV
EQVHRGTTIANVVSNSVGTTSGILTLLGLGLAPFTEGISFVLLDTGMGLGAAAAVAGI
TCSVVELVNKLRARAQARNLDQSGTNVAKVMKEFVGGNTPNVLTLVDNWYQVTQGIGR
NIRAIRRARANPQLGAYAPPPHVIGRISAEGGEQVERVVEGPAQAMSRGTMIVGAATG
GILLLLDVVSLAYESKHLLEGAKSESAEELKKRAQELEGKLNFLTKIHEMLQPGQDQ"
BASE COUNT 381 a 352 c 423 g 265 t
ORIGIN
1 attacacaga tgcacagctg gacgtgggat ccacacagct cagaacagtt ggatcttgct
61 cagtctctgt cagaggaaga tcccttgtca agcctgaggg gcagtatcca gcctcaaccc
121 ccagcagagg ctccagacaa aggtgggagc caggccaaca atgacccagg aggatgggat
181 cctggatgca gctcctcaca agtattgggc aggacaagag gaccctgcct tggtgtgaga
241 gtgagggaag aggaagctgg aacgagggtt aaggaaaacc ttccagtctg gacagtgact
301 ggagagctcc aaggaaagcc cctcggtaac ccagccgctg gcaccatgaa cccagagagc
361 agtatcttta ttgaggatta ccttaagtat ttccaggacc aagtgagcag agagaatctg
421 ctacaactgc tgactgatga tgaagcctgg aatggattcg tggctgctgc tgaactgccc
481 agggatgagg cagatgagct ccgtaaagct ctgaacaagc ttgcaagtca catggtcacg
541 aaggacaaaa accgccacga taaagaccag cagcacaggc agtggttttt gaaagagttt
601 cctcggttga aaagggagct tgaggatcac ataaggaagc tccgtgccct tgcagaggag
661 gttgagcagg tccacagagg caccaccatt gccaatgtgg tgtccaactc tgttggcact
721 acctctggca tcctgaccct cctcggcctg ggtctggcac ccttcacaga aggaatcagt
781 tttgtgctct tggacactgg catgggtctg ggagcagcag ctgctgtggc tgggattacc
841 tgcagtgtgg tagaactagt aaacaaattg cgggcacgag cccaagcccg caacttggac
901 caaagcggca ccaatgtagc aaaggtgatg aaggagtttg tgggtgggaa cacacccaat
961 gttcttacct tagttgacaa ttggtaccaa gtcacacaag ggattgggag gaacatccgt
1021 gccatcagac gagccagagc caaccctcag ttaggagcgt atgccccacc cccgcatgtc
1081 attgggcgaa tctcagctga aggcggtgaa caggttgaga gggttgttga aggccccgcc
1141 caggcaatga gcagaggaac catgatcgtg ggtgcagcca ctggaggcat cttgcttctg
1201 ctggatgtgg tcagccttgc atacgagtca aagcacttgc ttgagggggc aaagtcagag
1261 tcagctgagg agctgaagaa gcgggctcag gagctggagg ggaagctcaa ctttctcacc
1321 aagatccatg agatgctgca gccaggccaa gaccaatgac cccagagcag tgcagccacc
1381 agggcagaaa tgccgggcac aggccaggac aaaatgcaga c
//