LOCUS AK303972 2131 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54081 complete cds, highly similar to
Keratin, type II cytoskeletal 5.
ACCESSION AK303972
VERSION AK303972.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2131)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2131
/clone="TRACH2021568"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000498596"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 99..1766
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 5"
/protein_id="BAG64893.1"
/transl_table=1
/translation="MSRQSSVSFRSGGSRSFSTASAITPSVSRTSFTSVSRSGGGGGG
GFGRVSLAGACGVGGYGFGGGAGSGFGFGGGAGGGFGLGGGAGFGGGFGGPGFPVCPP
GGIQEVTVNQSLLTPLNLQIDPSIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKV
LETKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRNMQDLVED
LKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFDAEL
SQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIANRSRTEAESWYQTKYEELQ
QTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKD
ARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEG
VGPVNISVVTSSVSSGYGSGGGYGGGLGGGLGGGLGGGLAGGSSGSYYSSSSGGVGLG
GGLSVGGSGFSASSGRGLGVGFGSGGGSSSSVKFVSTTSSSRKSFKS"
BASE COUNT 474 a 571 c 638 g 448 t
ORIGIN
1 aacagagcca ccttctgcgt cctgctgagc tctgttctct ccagcacctc ccaacccact
61 agtgcctggt tctcttgctc caccaggaac aagccaccat gtctcgccag tcaagtgtgt
121 ccttccggag cgggggcagt cgtagcttca gcaccgcctc tgccatcacc ccgtctgtct
181 cccgcaccag cttcacctcc gtgtcccggt ccgggggtgg cggtggtggt ggcttcggca
241 gggtcagcct tgcgggtgct tgtggagtgg gtggctatgg ctttggaggt ggtgccggta
301 gtggatttgg tttcggcggt ggagctggtg gtggctttgg gctcggtggc ggagctggct
361 ttggaggtgg cttcggtggc cctggctttc ctgtctgccc tcctggaggt atccaagagg
421 tcactgtcaa ccagagtctc ctgactcccc tcaacctgca aatcgacccc agcatccaga
481 gggtgaggac cgaggagcgc gagcagatca agaccctcaa caataagttt gcctccttca
541 tcgacaaggt gcggttcctg gagcagcaga acaaggttct ggaaacaaag tggaccctgc
601 tgcaggagca gggcaccaag actgtgaggc agaacctgga gccgttgttc gagcagtaca
661 tcaacaacct caggaggcag ctggacagca tcgtggggga acggggccgc ctggactcag
721 agctgagaaa catgcaggac ctggtggaag acctcaagaa caagtatgag gatgaaatca
781 acaagcgtac cactgctgag aatgagtttg tgatgctgaa gaaggatgta gatgctgcct
841 acatgaacaa ggtggagctg gaggccaagg ttgatgcact gatggatgag attaacttca
901 tgaagatgtt ctttgatgcg gagctgtccc agatgcagac gcatgtctct gacacctcag
961 tggtcctctc catggacaac aaccgcaacc tggacctgga tagcatcatc gctgaggtca
1021 aggcccagta tgaggagatt gccaaccgca gccggacaga agccgagtcc tggtatcaga
1081 ccaagtatga ggagctgcag cagacagctg gccggcatgg cgatgacctc cgcaacacca
1141 agcatgagat ctctgagatg aaccggatga tccagaggct gagagccgag attgacaatg
1201 tcaagaaaca gtgcgccaat ctgcagaacg ccattgcgga tgccgagcag cgtggggagc
1261 tggccctcaa ggatgccagg aacaagctgg ccgagctgga ggaggccctg cagaaggcca
1321 agcaggacat ggcccggctg ctgcgtgagt accaggagct catgaacacc aagctggccc
1381 tggacgtgga gatcgccact taccgcaagc tgctggaggg cgaggaatgc agactcagtg
1441 gagaaggagt tggaccagtc aacatctctg ttgtcacaag cagtgtttcc tctggatatg
1501 gcagtggcgg tggctatggc ggtggcctcg gtggaggtct tggcggcggc ctcggtggag
1561 gtcttgccgg aggtagcagt ggaagctact actccagcag cagtgggggt gtcggcctag
1621 gtggtgggct cagtgtgggg ggctctggct tcagtgcaag cagtggccga gggctggggg
1681 tgggctttgg cagtggcggg ggtagcagct ccagcgtcaa atttgtctcc accacctcct
1741 cctcccggaa gagcttcaag agctaagaac ctgctgcaag tcactgcctt ccaagtgcag
1801 caacccagcc catggagatt gcctcttcta ggcagttgct caagccatgt tttatccttt
1861 tctggagagt agtctagacc aagccaattg cagaaccaca ttctttggtt cccaggagag
1921 ccccattccc agcccctggt ctcccgtgcc gcagttctat attctgcttc aaatcagcct
1981 tcaggtttcc cacagcatgg cccctgctga cacgagaacc caaagttttc ccaaatctaa
2041 atcatcaaaa cagaatcccc accccaatcc caaattttgt tttggttcta actacctcca
2101 gaatgtgttc aataaaatgc ttttataata t
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