LOCUS AK303923 2633 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53430 partial cds, highly similar to Homo
sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript
variant 3, mRNA.
ACCESSION AK303923
VERSION AK303923.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2633)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2633
/clone="TRACH2013318"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000498547"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 111..>2633
/codon_start=1
/note="highly similar to Homo sapiens FERM and PDZ domain
containing 2 (FRMPD2), transcript variant 3, mRNA"
/protein_id="BAG64851.1"
/transl_table=1
/translation="MQPLTKDAGMSLSSVTLASALQVRGEALSEEEIWSLLFLAAEQL
LEDLRNDSSDYVVCPWSALLSAAGSLSFQGRVSHIEAAPFKAPELLQGQSEDEQPDAS
QMHVYSLGMTMCEDQPHRRCTLQSVLEACRVHEKEVFVYPAPAGLHIRRLVGLVLGTI
SEVEKRVVEESSSVQQNRSYLLRKRLRGTSSESPAAQAPECLHPCRVSERSTETQSSP
EPHWSTLTHSHCSLLVNRALPGADPQDQQAGRRLSSGSVHSAADSSWPTTPSQRGFLQ
RRSKFSRPEFILLAGEAPMTLHLPGSVVTKKGKSYLALRDLCVVLLNGQHLEVKCDVE
STVGAVFNAVTSFANLEELTYFGLAYMKSKEFFFLDSETRLCKIAPEGWREQPQKTSM
NTFTLFLRIKFFVSHYGLLQHSLTRHQFYLQLRKDILEERLYCNEEILLQLGVLALQA
EFGNYPKEQVESKPYFHVEDYIPASLIERMTALRVQVEVSEMHRLSSALWGEDAELKF
LRVTQQLPEYGVLVHQVFSEKRRPEEEMALGICAKGVIVYEVKNNSRIAMLRFQWRET
GKISTYQKKFTITSSVTGKKHTFVTDSAKTSKYLLDLCSAQHGFNAQMGSGQPSHVLF
DHDKFVQMANLSPAHQARSKPLIWIQRLSCSENELFVSRLQGAAGGLLSTSMDNFNVD
GSKEAGAEGIGRSPCTGREQLKSACVIQKPMTWDSLSGPPVQSMHAGSKNNRRKSFIA
EPGREIVRVTLKRDPHRGFGFVINEGEYSGQADPGIFISSIIPGGPAEKAKTIKPGGQ
ILALNHISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNP"
BASE COUNT 664 a 640 c 728 g 601 t
ORIGIN
1 aacagtgctg gtggcaggga gctccgcgga cagacttgca agagacccct gctccttgtt
61 ggaaagttgt cccatgatga aggcctagac ctggtcacgg agacttttgg atgcagcctt
121 taacgaagga cgcaggcatg agcctgtcct ctgtgacgct ggccagcgcc ctacaggtca
181 ggggtgaagc tctgtctgag gaggaaatct ggtccctcct gttcctggcc gctgagcagc
241 tcctggaaga cctccgcaac gattcctcgg actatgtggt ttgcccctgg tcagccctgc
301 tttctgcagc tggaagcctt tctttccaag gccgtgtttc tcatatagaa gctgctcctt
361 tcaaggcccc tgaactgcta cagggacaga gtgaggatga gcagcctgat gcatctcaga
421 tgcatgtcta ttctttagga atgaccatgt gtgaagacca gcctcacagg cggtgcacgt
481 tgcagtcggt tctggaagct tgtcgggttc atgagaaaga agtgtttgtc tacccagccc
541 ctgctggtct ccacatcaga aggctggttg gcttggttct gggtaccatt tctgaggtgg
601 agaaaagagt tgtggaggaa agctcctctg tgcagcagaa cagaagctac ctgctcagga
661 agaggctgcg tgggacaagc agcgagagcc cagcggcaca ggccccggag tgtctgcatc
721 cttgcagagt ttcagaaaga agcacggaga cccagagctc accagagccc cattggagca
781 ccttgacaca cagtcactgc agcctccttg ttaaccgcgc tcttccagga gcagatcccc
841 aggaccagca ggcgggccgg aggctcagct ctggatctgt gcactcggca gcagacagct
901 catggccaac aactccttct cagaggggtt ttctgcaaag aaggagcaag ttttccaggc
961 cagagttcat cctgttggct ggagaggccc cgatgacact acatctgccg ggatcggttg
1021 tgaccaaaaa agggaaatcc tatttggctc tcagggacct ctgtgtggtc ctgctgaacg
1081 ggcagcacct ggaggtaaaa tgtgatgttg aatcaacagt gggagctgtc ttcaatgccg
1141 tgacatcctt tgccaacctc gaggaactca cctactttgg cttggcgtat atgaaaagca
1201 aagagttctt tttcctggac agtgaaacca gattgtgcaa aatagctcct gaaggctgga
1261 gagagcagcc tcagaagacc tccatgaata ccttcacact cttcctgagg ataaagttct
1321 ttgtcagcca ctatgggctg ctccagcaca gcctgacaag gcaccagttt tacctgcagc
1381 ttcggaaaga tatcctggag gagaggctgt actgcaatga agagatactg ctgcagctgg
1441 gggtccttgc cttgcaggct gagtttggca attaccctaa ggagcaggtg gagagtaagc
1501 catactttca cgttgaagat tacatcccag cgagtctgat cgagaggatg accgctctac
1561 gggtccaggt tgaagtctca gagatgcacc ggctcagctc tgcactgtgg ggagaggatg
1621 ctgagctgaa gttcttgagg gtcactcagc agctcccaga atacggtgtg ctggttcacc
1681 aagtattctc agagaagagg aggccagaag aggagatggc cctggggatc tgtgccaagg
1741 gtgtcatagt ctatgaagtg aaaaacaaca gcagaattgc aatgttacgg tttcagtgga
1801 gagaaaccgg gaagatttct acttatcaaa aaaagttcac catcacaagc agtgtcactg
1861 ggaagaagca cacatttgtc acagattcag ccaagaccag taaatactta ctggacctct
1921 gctcagccca gcatgggttt aatgcacaga tgggctctgg gcagccttcc catgttttat
1981 ttgaccatga taagtttgtg caaatggcca atttgagtcc tgcacaccag gcccggtcta
2041 agcctctcat ttggattcag agattgtcat gctcagaaaa cgagttgttt gtatccaggc
2101 ttcagggtgc tgcaggaggc ctgctgagta catcaatgga taacttcaac gtggacggca
2161 gcaaggaggc tggagcagaa ggcatcgggc gcagcccctg cactggccgg gagcagctga
2221 agagtgcctg tgtgatccag aagccaatga cctgggactc tctctctgga ccacctgttc
2281 agagcatgca tgcaggctca aagaataata ggaggaagag ctttatagct gaaccgggcc
2341 gagaaattgt acgtgtgaca ctgaaacgtg acccacatcg tggttttggg tttgtcatta
2401 atgagggaga gtattcaggc caagctgacc ctggcatttt tatatcttct attatacctg
2461 gaggaccagc agaaaaagca aaaacgatca aaccaggagg gcagatacta gccctgaatc
2521 acatcagtct ggagggcttc acattcaaca tggctgttag gatgatccag aattcccctg
2581 acaacataga attaattatt tctcagtcaa aaggtgttgg tggaaataac cca
//