LOCUS AK303900 909 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ52045 complete cds, highly similar to Homo
sapiens calpastatin (CAST), transcript variant 5, mRNA.
ACCESSION AK303900
VERSION AK303900.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 909)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..909
/clone="TRACH2010118"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000498524"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 154..699
/codon_start=1
/note="highly similar to Homo sapiens calpastatin (CAST),
transcript variant 5, mRNA"
/protein_id="BAH14077.1"
/transl_table=1
/translation="MNPTETKAVKTEPEKKSQSTKLSVVHEKKSQEGKPKEHTEPKSL
PKQASDTGSNDAHNKKAVSRSAEQQPSEKSTEPKKKEKKSLTPAVPVESKPDKPSGKS
GMDAALDDLIDTLGGPEETEEENTTYTGPEVSDPMSSTYIEELGKRGIYRSFKSSVSR
DSQKCCSTPREEKKGGEGYNE"
BASE COUNT 337 a 202 c 223 g 147 t
ORIGIN
1 actcagagag ctgggctgga gctccaagcg gaaaccgcgg gagccgagcc cagctaggaa
61 tgcagacctc ctgaaaacca agccgaggac tgcggggtcc ggtgtccacg cagagtgtca
121 gcttcctctg gtgcaaccag caagtcttcc agtatgaatc ccacagaaac caaggctgta
181 aaaacagaac ctgagaagaa gtcacagtca accaagctgt ctgtggttca tgagaaaaaa
241 tcccaagaag gaaagccaaa agaacacaca gagccaaaaa gcctacccaa gcaggcatca
301 gatacaggaa gtaacgatgc tcacaataaa aaagcagttt ccagatcagc tgaacagcag
361 ccatcagaga aatcaacaga accaaagaaa aaagaaaaga aatcattaac cccagctgtg
421 ccagttgaat ctaaaccgga taaaccatcg ggaaagtcag gcatggatgc tgctttggat
481 gacttaatag atactttagg aggacctgaa gaaactgaag aagaaaatac aacgtatact
541 ggaccagaag tttcagatcc aatgagttcc acctacatag aggaattggg taaaagagga
601 atctacagaa gttttaaaag ctcagtcagc agggacagtc agaagtgctg ctccacccca
661 agagaagaaa agaaaggtgg agaaggatac aatgagtgat caagcactcg aggctctgtc
721 ggcttcactg ggcacccggc aagcagaacc tgagctcgac ctccgctcaa ttaaggaagt
781 cgatgaggca aaagctaaag aagaaaaact agagaagtgt ggtgaggatg atgaaacaat
841 cccatctgag tacagattaa aaccagccac ggataaagat ggaaaaccac tattgccaga
901 gcctgaaga
//