LOCUS AK303870 1218 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54862 complete cds, weakly similar to Homo
sapiens thrombospondin repeat containing 1 (TSRC1), transcript
variant 2, mRNA.
ACCESSION AK303870
VERSION AK303870.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1218)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1218
/clone="TRACH2005524"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000498494"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 183..1172
/codon_start=1
/note="weakly similar to Homo sapiens thrombospondin
repeat containing 1 (TSRC1), transcript variant 2, mRNA"
/protein_id="BAG64808.1"
/transl_table=1
/translation="MFVSYLILTLLHVQTAVLARPGGESIGCDDYLGSDKVVDKCGVC
GGDNTGCQVVSGVFKHALTSLGYHRVVEIPEGATKINITEMYKSNNYLALRSRSGRSI
INGNWAIDRPGKYEGGGTMFTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPG
VHYEYVIMGTNAISPQVPPHRRPGEPFNGQMVTEGRSQEEGEQKGRNEEKEDLRGEAP
EMFTSESAQTFPVRHPDRFSPHRPDNLVPPAPQPPRRSRDHNWKQLGTTECSTTCGKG
EPVWGTGGSLQNPKQGVCGWPKAAVPGFFGTRDWFRGRRFLHGWWRGWGMVSG"
BASE COUNT 306 a 302 c 377 g 233 t
ORIGIN
1 ttttcttcag aacagaggct gagctcgaag cgccgggcag tacagtgagg gagagccgag
61 ggaaccagcg cggtgcctag cggaactcca gggctggaat cccgagacac aagtgcatct
121 gctagctgtt agcacttggc agacggagtt ctcctctagg gtagttctaa ctttgggtaa
181 taatgtttgt cagctacctg atattaacat tgctccacgt tcaaacagca gtgttagcaa
241 gacctggggg agagagcatt ggctgtgatg actacttagg ctccgacaaa gtcgtggaca
301 aatgtggggt gtgtggagga gacaacacgg gctgtcaggt tgtgtcgggc gtgtttaagc
361 atgccctcac cagcctgggc taccaccgcg tcgtggagat tcccgaggga gccacgaaaa
421 tcaacatcac ggagatgtac aagagcaaca actatttggc cctgagaagt cgttctggac
481 gctccatcat caatgggaac tgggcaattg atcgaccagg aaaatacgag ggcggaggga
541 ccatgttcac ctacaagcgt ccaaatgaga tttcgagcac tgccggagag tcctttttgg
601 cggaaggtcc caccaacgag atcttggatg tctacatgat acaccagcag ccaaacccag
661 gcgtgcacta cgagtacgtg atcatgggga ccaacgccat cagcccccag gtgccacccc
721 acaggagacc aggggaaccc ttcaatggcc agatggtgac agaaggcagg agccaggagg
781 agggagaaca gaaagggagg aacgaggaga aggaagactt gcgtggggag gcccctgaga
841 tgttcacctc agaatcggca cagaccttcc cagtcaggca tccagacaga ttttctcccc
901 atcgaccgga caacttggtg ccaccagcac cgcagccccc acggcgcagc cgggatcaca
961 actggaagca gcttgggaca acagaatgtt ccacgacctg tgggaaaggt gagcctgtgt
1021 gggggacggg tggatccctg cagaacccta agcaaggagt gtgtgggtgg cccaaggcag
1081 cggtccccgg cttttttggc accagggact ggtttcgtgg aagacgattt ctccatggat
1141 ggtggcgggg ttgggggatg gtttctgggt gaaactgccc tatcgcagat catcaggcat
1201 tagttagagt ctcataag
//