LOCUS AK303863 2191 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58464 complete cds, highly similar to Homo
sapiens pre-B-cell leukemia transcription factor interacting
protein 1 (PBXIP1), mRNA.
ACCESSION AK303863
VERSION AK303863.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2191)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2191
/clone="TRACH2004445"
/clone_lib="TRACH2"
/db_xref="H-InvDB:HIT000498487"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 76..1752
/codon_start=1
/note="highly similar to Homo sapiens pre-B-cell leukemia
transcription factor interacting protein 1 (PBXIP1), mRNA"
/protein_id="BAG64802.1"
/transl_table=1
/translation="MASCPDSDNSWVLAGGELGISLNMCLLGALVLLGLGVLLFSGGL
SESETGPMEEVERQVLPDPEVLEAVGDRQDGLREQLQAPVPPDSVPSLQNMGLLLDKL
AKENQDIRLLQAQLQAQKEELQSLMHQPKGLEEENAQLRGALQQGEAFQRALESELQQ
LRARLQGLEADCVRGPDGVCLSGGRGPQGDKAIREQGPREQEPELSFLKQKEQLEAEA
QALRQELERQRRLLGSVQQDLERSLQDASRGDPAHAGLAELGHRLAQKLQGLENWGQD
PGVSANASKAWHQKSHFQNSREWSGKEKWWDGQRDRKAEHWKHKKEESGRERKKNWGG
QEDREPAGRWKEGRPRVEESGSKKEGKRQGPKEPPRKSGSFHSSGEKQKQPRWREGTK
DSHDPLPSWAELLRPKYRAPQGCSGVDECARQEGLTFFGTELAPVRQQELASLLRTYL
ARLPWAGQLTKELPLSPAFFGEDGIFRHDRLRFRDFVDALEDSLEEVAVQQTGDDDEV
DDFEDFIFSHFFGDKALKKRSGKKDKHSQSPRAAGPREGHSHSHHHHHRG"
BASE COUNT 503 a 566 c 742 g 380 t
ORIGIN
1 aacaagttaa gctgaagacc gaagcaagag ctggttcagg tggcagccac agcagcctca
61 gggacctcag caactatggc ctcctgccca gactctgata atagctgggt gcttgcaggc
121 ggggagctgg gcatctccct caacatgtgc ctccttgggg ccctggttct gcttggcctg
181 ggggtcctcc tcttctcagg tggcctctca gagtctgaga ctgggcccat ggaggaagtg
241 gagcggcagg tcctcccaga ccccgaggtg ctggaagctg tgggggacag gcaggatggg
301 ctaagggaac agctgcaggc cccagtgcct cctgacagtg tccccagcct gcaaaacatg
361 ggtcttctgc tggacaagct ggccaaggag aaccaggaca tccggctgct gcaggcccag
421 ctgcaggccc aaaaggaaga gcttcagagc ctgatgcacc agcccaaagg gctagaggag
481 gagaatgccc agctccgggg ggctctgcag cagggcgaag ccttccagcg ggctctggag
541 tcagagctgc agcagctgcg ggcccggctc caggggctgg aggccgactg tgtccggggc
601 ccagatgggg tgtgcctcag tgggggtaga ggcccacagg gtgacaaggc catcagggag
661 caaggcccca gggagcagga gccagaactc agcttcctga agcagaagga acagctggag
721 gctgaggcac aggcattaag gcaagagtta gagaggcagc gacggctgct ggggtctgta
781 cagcaggatc tggagaggag cttgcaggat gccagccgcg gggacccagc tcatgctggc
841 ttggctgagc tgggccacag attggcccag aaactgcagg gcctggagaa ctggggccag
901 gaccctgggg tctctgccaa tgcctcaaag gcctggcacc agaagtccca cttccagaat
961 tctagggagt ggagtggaaa ggaaaagtgg tgggatgggc agagagaccg gaaggctgag
1021 cactggaaac ataagaagga agaatctggc cgggaaagga agaagaactg gggaggtcag
1081 gaggacaggg agccagcagg aaggtggaag gagggcaggc caagggtgga ggagtcgggg
1141 agcaagaagg agggcaagcg acagggcccg aaggaacccc caaggaaaag tggtagcttc
1201 cactcctctg gagaaaagca gaagcaacct cggtggaggg aagggactaa ggacagccat
1261 gaccccctgc catcctgggc agagctgttg aggcccaagt accgggcacc ccagggctgc
1321 tcaggtgtgg acgagtgtgc ccggcaggag ggcctgactt tctttggcac agagctagcc
1381 ccagtgcggc aacaggagct ggcctctctg ctaagaacat acttggcacg gctgccctgg
1441 gctgggcagc tgaccaagga gctacccctc tcacctgctt tctttggtga ggatggcatc
1501 ttccgtcatg accgcctccg cttccgggat tttgtggatg ccctggagga cagcttggag
1561 gaggtggctg tgcaacagac aggtgatgat gatgaagtag atgactttga ggacttcatc
1621 ttcagccact tctttggaga caaagcactg aagaagaggt cagggaagaa ggacaagcac
1681 tcacagagcc caagagctgc ggggcccagg gaggggcaca gccatagcca ccaccaccac
1741 caccggggct gacaccctgc cccacaggga atggccttgg cctggcccag cccaagatcc
1801 cagcgttatc taactcctgg agggtggact ctgtcctggc ttgtttggtg tcctcagata
1861 tctttcacac agtagagcaa aatcaccagc cctgcactga tgtcacttta tgtagaaaaa
1921 ggccttagct ggacctgcgt tgccgtctat gcaaatgcat gcaaatactc caggccctgg
1981 gatgtgggct tgtgttttgt cactgtgaag ggggagatgg gagaggagcc tgttttgggg
2041 tggggtctgg ggaaggcaat ctgattctga agctaaagag ctttcatcct cttgagtgta
2101 tgtccccata gtgggcccct tgacccacat gctgaccggt gccttgggat ttgactagag
2161 ttgctggctc gaggcccagc acgaggactt a
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