LOCUS AK303836 1539 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ52193 complete cds, highly similar to
Calpastatin.
ACCESSION AK303836
VERSION AK303836.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1539)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1539
/clone="TOVAR2000283"
/clone_lib="TOVAR2"
/db_xref="H-InvDB:HIT000498460"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="ovary, tumor tissue"
CDS 80..1120
/codon_start=1
/note="highly similar to Calpastatin"
/protein_id="BAH14064.1"
/transl_table=1
/translation="MDAALDDLIDTLGGPEETEEENTTYTGPEVSDPMSSTYIEELGK
REVTIPPKYRELLAKKEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGKKTEKE
ESTEVLKAQSAGTVRSAAPPQEKKRKVEKDTMSDQALEALSASLGTRQAEPELDLRSI
KEVDEAKAKEEKLEKCGEDDETIPSEYRLKPATDKDGKPLLPEPEEKPKPRSESELID
ELSEDFDRSECKEKPSKPTEKTEESKAAAPAPVSEAVCRTSMCSIQSAPPEPATLKGT
VPDDAVEALADSLGKKEADPEDGKPVMDKVKEKAKEEDREKLGEKEETIPPDYRLEEV
KVNRLESFSILF"
BASE COUNT 537 a 314 c 362 g 326 t
ORIGIN
1 agccgagccc agctaggaat gcagacctcc tgaaaaccaa gccgaggact gcggggtccg
61 gtgtccacgc agatcaggca tggatgctgc tttggatgac ttaatagata ctttaggagg
121 acctgaagaa actgaagaag aaaatacaac gtatactgga ccagaagttt cagatccaat
181 gagttccacc tacatagagg aattgggtaa aagagaagtc acaattcctc caaaatatag
241 ggaactattg gctaaaaagg aagggatcac agggcctcct gcagactctt cgaaacccat
301 agggccagat gatgctatag acgccttgtc atctgacttc acctgtgggt cgcctacagc
361 tgctggaaag aaaactgaaa aagaggaatc tacagaagtt ttaaaagctc agtcagcagg
421 gacagtcaga agtgctgctc caccccaaga gaagaaaaga aaggtggaga aggatacaat
481 gagtgatcaa gcactcgagg ctctgtcggc ttcactgggc acccggcaag cagaacctga
541 gctcgacctc cgctcaatta aggaagtcga tgaggcaaaa gctaaagaag aaaaactaga
601 gaagtgtggt gaggatgatg aaacaatccc atctgagtac agattaaaac cagccacgga
661 taaagatgga aaaccactat tgccagagcc tgaagaaaaa cccaagcctc ggagtgaatc
721 agaactcatt gatgaacttt cagaagattt tgaccggtct gaatgtaaag agaaaccatc
781 taagccaact gaaaagacgg aagaatctaa ggccgctgct ccagctcctg tgtcggaggc
841 tgtgtgtcgg acctccatgt gtagtataca gtcagcaccc cctgagccgg ctaccttgaa
901 gggcacagtg ccagatgatg ctgtagaagc cttggctgat agcctgggga aaaaggaagc
961 agatccagaa gatggaaaac ctgtgatgga taaagtcaag gagaaggcca aagaagaaga
1021 ccgtgaaaag cttggtgaaa aagaagaaac aattcctcct gattatagat tagaagaggt
1081 caaggtaaac aggctggagt ccttttctat tttattttaa ttcatactga attcatacac
1141 agaacaaagg tacttgggaa cagaactgga atataaagat cttgtttctt catatttcaa
1201 acaccaaata gtattagtct actactaata gtgttagaac accagataca aagctaaaat
1261 attcctaagt agacttgatc ctcaagtgaa agaaatctaa tgtctaagct acctaatgtt
1321 ttcctttcta acccacagct tgttacaata ccagaaatat taaaaaacct tgtgtagata
1381 ggagaactaa aatgaggaat aggccgggca tggtggctca tgcctataat cccagaagtt
1441 tagaaggcca aggcaggagc atctcttgag cccaggagtt caagactagc ctgggcaaca
1501 taatgagacc ctgtctctac aaaaaaatca aaaaaatta
//