LOCUS AK303835 1492 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56558 complete cds, highly similar to Homo
sapiens secernin 2 (SCRN2), mRNA.
ACCESSION AK303835
VERSION AK303835.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1492)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1492
/clone="TOVAR2000240"
/clone_lib="TOVAR2"
/db_xref="H-InvDB:HIT000498459"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="ovary, tumor tissue"
CDS 83..1219
/codon_start=1
/note="highly similar to Homo sapiens secernin 2 (SCRN2),
mRNA"
/protein_id="BAH14063.1"
/transl_table=1
/translation="MASSSPDSPCSCDCFVSVPPASAIPAVIFAKNSDRPRDEVQEVV
FVPAGTHTPGSRLQCTYIEVEQVSKTHAVILSRPSWLWGAEMGANEHGVCIGNEAVWT
KEPVGEGEALLGMDLLRLALERSSSAQEALHVITGLLEHYGQGGNCLEDAAPFSYHST
FLLADRTEAWVLETAGRLWAAQRIQEGARNISNQLSIGTDISAQHPELRTHAQAKGWW
DGQGAFDFAQIFSLTQQPVRMEAAKARFQAGRELLRQRQGGITAEVMMGILRDKESGI
CMDSGGFRTTASMVSVLPQDPTQPCVHFLTATPDPSRSVFKPFIFGVGVAQAPQVLSP
TFGAQDPVRTLPRFQTQVDRRHTLYRGHQAALGLMERDQVSPRE"
BASE COUNT 275 a 435 c 496 g 286 t
ORIGIN
1 gtctccgccc aatggggcgg ccctggccag aagcggagga ggtggcaccc gggaccgagc
61 tggggtcttg gaggaagaga ggatggcgtc gtcgagccct gactccccat gttcctgcga
121 ctgctttgtc tccgtgcccc cggcctcagc catcccggct gtgatctttg ccaagaactc
181 ggaccgaccc cgggacgagg tgcaggaggt ggtgtttgtc cccgcaggca ctcacactcc
241 tgggagccgg ctccagtgca cctacattga agtggaacag gtgtcgaaga cgcacgctgt
301 gattctgagc cgtccttctt ggctatgggg ggctgagatg ggcgccaacg agcatggtgt
361 ctgcattggc aacgaggctg tgtggacgaa ggagccagtt ggggaggggg aagccctgct
421 gggcatggac ctactcaggc tggctttgga acggagcagc tctgcccagg aggccttgca
481 tgtgatcaca gggttactgg agcactatgg gcaggggggc aactgcctgg aggatgctgc
541 gccattctcc taccatagca ccttcctgct ggctgaccgc actgaggcgt gggtgctgga
601 gacagctggg aggctctggg ctgcacagag gatccaggag ggggcccgca acatctccaa
661 ccagctgagc attggcacgg acatctcggc ccaacacccg gagctgcgga ctcatgccca
721 ggccaagggc tggtgggatg ggcagggtgc ctttgacttt gctcagatct tctccctgac
781 ccagcagcct gtgcgcatgg aggctgccaa ggcccgcttc caggcagggc gggagctgct
841 gcggcaacgg caagggggca tcacggcaga ggtgatgatg ggcatcctca gagacaagga
901 gagtggtatc tgtatggact cgggaggctt tcgcaccacg gccagcatgg tgtctgtcct
961 gccccaggat cccacgcagc cctgcgtgca ctttcttacc gccacgccag acccatccag
1021 gtctgtgttc aaacctttca tcttcggggt gggggtggcc caggcccccc aggtgctgtc
1081 ccccactttt ggagcacaag accctgttcg gaccctgccc cgattccaga ctcaggtaga
1141 tcgtcggcat accctctacc gtggacacca ggcagccctg gggctgatgg agagagatca
1201 ggtatccccc agggagtagg ggctaccttg aggggatgat agacctcccc cactcccagt
1261 gggactctgg aaatatgaag gaactaggga gtggaagaga tttcagagct ggggagagga
1321 gttcctccct tcaaagccag caactgcctt tggggaatgt cggggggtat ctcctttctc
1381 ctgcttgtgt gaggtggtac acagtccccc cttcacctgg cgggaagcct gtcccggaca
1441 ggctcatctc agctttccct tggggcagga tcgggggcag cagctccagc ag
//