LOCUS AK303830 1632 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53692 complete cds, moderately similar to
Granulins precursor.
ACCESSION AK303830
VERSION AK303830.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1632)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1632
/clone="TLUNG2002179"
/clone_lib="TLUNG2"
/db_xref="H-InvDB:HIT000498454"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="lung, tumor tissue"
CDS 38..1348
/codon_start=1
/note="moderately similar to Granulins precursor"
/protein_id="BAG64777.1"
/transl_table=1
/translation="MWTLVSWVALTAGLVAGTRCPDGQFCPVACCLDPGGASYSCCRP
LLDKWPTTLSRHLGGPCQVDAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRG
FHCSADGRSCFQRSGNNSVGAIQCPDSQFECPDFSTCCVMVDGSWGCCPFTQAVCCED
HIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLSLPDPQALKRDVPCDNVSSCPSS
DTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRGSEIVAGLEKMPARR
ASLSHPRDIGCDQHTSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCNVK
ARSCEKEVVSAQPATFLARSPHVGVKDVECGEGHFCHDNQTCCRDNRQGWACCPYRQG
VCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL"
BASE COUNT 274 a 526 c 502 g 330 t
ORIGIN
1 gctgcccaag gaccgcggag tcggacgcag gcagaccatg tggaccctgg tgagctgggt
61 ggccttaaca gcagggctgg tggctggaac gcggtgccca gatggtcagt tctgccctgt
121 ggcctgctgc ctggaccccg gaggagccag ctacagctgc tgccgtcccc ttctggacaa
181 atggcccacg acactgagca ggcatctggg tggcccctgc caggttgatg cccactgctc
241 tgccggccac tcctgcatct ttaccgtctc agggacttcc agttgctgcc ccttcccaga
301 ggccgtggca tgcggggatg gccatcactg ctgcccacgg ggcttccact gcagtgcaga
361 cgggcgatcc tgcttccaaa gatcaggtaa caactccgtg ggtgccatcc agtgccctga
421 tagtcagttc gaatgcccgg acttctccac gtgctgtgtt atggtcgatg gctcctgggg
481 ctgctgccct tttacccagg ctgtgtgctg tgaggaccac atacactgct gtcccgcggg
541 gtttacgtgt gacacgcaga agggtacctg tgaacagggg ccccaccagg tgccctggat
601 ggagaaggcc ccagctcacc tcagcctgcc agacccacaa gccttgaaga gagatgtccc
661 ctgtgataat gtcagcagct gtccctcctc cgatacctgc tgccaactca cgtctgggga
721 gtggggctgc tgtccaatcc cagaggctgt ctgctgctcg gaccaccagc actgctgccc
781 ccagggctac acgtgtgtag ctgaggggca gtgtcagcga ggaagcgaga tcgtggctgg
841 actggagaag atgcctgccc gccgggcttc cttatcccac cccagagaca tcggctgtga
901 ccagcacacc agctgcccgg tggggcagac ctgctgcccg agcctgggtg ggagctgggc
961 ctgctgccag ttgccccatg ctgtgtgctg cgaggatcgc cagcactgct gcccggctgg
1021 ctacacctgc aacgtgaagg ctcgatcctg cgagaaggaa gtggtctctg cccagcctgc
1081 caccttcctg gcccgtagcc ctcacgtggg tgtgaaggac gtggagtgtg gggaaggaca
1141 cttctgccat gataaccaga cctgctgccg agacaaccga cagggctggg cctgctgtcc
1201 ctaccgccag ggcgtctgtt gtgctgatcg gcgccactgc tgtcctgctg gcttccgctg
1261 cgcagccagg ggtaccaagt gtttgcgcag ggaggccccg cgctgggacg cccctttgag
1321 ggacccagcc ttgagacagc tgctgtgagg gacagtactg aagactctgc agccctcggg
1381 accccacttg gagggtgccc tctgctcagg cctccctagc acctctccct aaccaaattc
1441 tccctggacc ccattctgag ctccccatca ccatgggagg tggggcctca atctaaggcc
1501 ttccctgtca gaagggggtt gtggcaaaag ccacattaca agctgccatc ccctccccgt
1561 ttcagtggac cctgtggcca ggtgcttttc cctatccaca ggggtgtttg tgtgtgtgcg
1621 cgtgtgcgtt tc
//