LOCUS AK303796 971 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56764 complete cds, highly similar to Orphan
nuclear receptor NR1I3.
ACCESSION AK303796
VERSION AK303796.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 971)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..971
/clone="TLIVE2006761"
/clone_lib="TLIVE2"
/db_xref="H-InvDB:HIT000498420"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="liver, tumor tissue"
CDS 238..954
/codon_start=1
/note="highly similar to Orphan nuclear receptor NR1I3"
/protein_id="BAH14053.1"
/transl_table=1
/translation="MASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIG
PTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQT
PVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQFRPPAHLFIHHQPLPTLAPVLPLVTH
FADINTFMVLQVIKFTKDLPVFRSLPIEDQISLLKGAAVEICHIVLNTTFCLQTQNFL
CGPLRYTIEDGARGEMVLEQ"
BASE COUNT 246 a 271 c 250 g 204 t
ORIGIN
1 aaccccacag tcactgagag caactggagg ccacataaaa cagacatctc ttgttttcca
61 gatactacgg gtcataatcc ctaactccaa tcactggcaa ctcctgagat cagaggaaaa
121 ccagcaacag cgtgggagtt tggggagagg cattccatac cagattctgt ggcctgcagg
181 tgacatgctg cctaagagaa gcaggagtct gtgacagcca ccccaacacg tgacgtcatg
241 gccagtaggg aagatgagct gaggaactgt gtggtatgtg gggaccaagc cacaggctac
301 cactttaatg cgctgacttg tgagggctgc aagggtttct tcaggagaac agtcagcaaa
361 agcattggtc ccacctgccc ctttgctgga agctgtgaag tcagcaagac tcagaggcgc
421 cactgcccag cctgcaggtt gcagaagtgc ttagatgctg gcatgaggaa agacatgata
481 ctgtcggcag aagccctggc attgcggcga gcaaagcagg cccagcggcg ggcacagcaa
541 acacctgtgc aactgagtaa ggagcaagaa gagctgatcc ggacactcct gggggcccac
601 acccgccaca tgggcaccat gtttgaacag tttgtgcagt ttaggcctcc agctcatctg
661 ttcatccatc accagccctt gcccaccctg gcccctgtgc tgcctctggt cacacacttc
721 gcagacatca acactttcat ggtactgcaa gtcatcaagt ttactaagga cctgcctgtc
781 ttccgttccc tgcccattga agaccagatc tcccttctca agggagcagc tgtggaaatc
841 tgtcacatcg tactcaatac cactttctgt ctccaaacac aaaacttcct ctgcgggcct
901 cttcgctaca caattgaaga tggagcccgt ggtgagatgg tgctagagca atagggggca
961 tgtgtcctca t
//