LOCUS AK303777 1924 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56838 complete cds, highly similar to
Hydroxymethylglutaryl-CoA synthase, mitochondrial precursor (EC
2.3.3.10).
ACCESSION AK303777
VERSION AK303777.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1924)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1924
/clone="TLIVE2004769"
/clone_lib="TLIVE2"
/db_xref="H-InvDB:HIT000498401"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="liver, tumor tissue"
CDS 62..1462
/codon_start=1
/note="highly similar to Hydroxymethylglutaryl-CoA
synthase, mitochondrial precursor (EC 2.3.3.10)"
/protein_id="BAH14049.1"
/transl_table=1
/translation="MQRLLTPVKRILQLTRAVQETSLTPARLLPVAHQRFSTASAVPL
AKTDTWPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDI
NSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGI
DTTNACYGGTASLFNAANWMESSSWDGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQ
CYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFN
DFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLST
HNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSP
LDKLVSSTSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYL
ERVDEQHRRKYARRPV"
BASE COUNT 487 a 499 c 456 g 482 t
ORIGIN
1 atctctttca aggtttctgc tgggtttctg aactgctggg tttctgtttg ctcctctgga
61 gatgcagcgt ctgttgactc cagtgaagcg cattctgcaa ctgacaagag cggtgcagga
121 aacctccctc acacctgctc gcctgctccc agtagcccac caaaggtttt ctacagcctc
181 tgctgtcccc ctggccaaaa cagatacttg gccaaaggac gtgggcatcc tggccctgga
241 ggtctacttc ccagcccaat atgtggacca aactgacctg gagaagtata acaatgtgga
301 agcaggaaag tatacagtgg gcttgggcca gacccgtatg ggcttctgct cagtccaaga
361 ggacatcaac tccctgtgcc tgacggtggt gcaacggctg atggagcgca tacagctccc
421 atgggactct gtgggcaggc tggaagtagg cactgagacc atcattgaca agtccaaagc
481 tgtcaaaaca gtgctcatgg aactcttcca ggattcaggc aatactgata ttgagggcat
541 agataccacc aatgcctgct acggtggtac tgcctccctc ttcaatgctg ccaactggat
601 ggagtccagt tcctgggatg ggctgagggg aacccatatg gagaatgtgt atgacttcta
661 caaaccaaat ttggcctcgg agtacccaat agtggatggg aagctttcca tccagtgcta
721 cttgcgggcc ttggatcgat gttacacatc ataccgtaaa aaaatccaga atcagtggaa
781 gcaagctggc agcgatcgac ccttcaccct tgacgattta cagtacatga tctttcatac
841 acccttttgc aagatggtcc agaagtctct ggctcgcctg atgttcaatg acttcctgtc
901 agccagcagt gacacacaaa ccagcttata taaggggctg gaggctttcg gggggctaaa
961 gctggaagac acctacacca acaaggacct ggataaagca cttctaaagg cctctcagga
1021 catgttcgac aagaaaacca aggcttccct ttacctctcc actcacaatg ggaacatgta
1081 cacctcatcc ctgtacgggt gcctggcctc gcttctgtcc caccactctg cccaagaact
1141 ggctggctcc aggattggtg ccttctctta tggctctggt ttagcagcaa gtttcttttc
1201 atttcgagta tcccaggatg ctgctccagg ctctcccctg gacaagttgg tgtccagcac
1261 atcagacctg ccaaaacgcc tagcctcccg aaagtgtgtg tctcctgagg agttcacaga
1321 aataatgaac caaagagagc aattctacca taaggtgaat ttctccccac ctggtgacac
1381 aaacagcctt ttcccaggta cttggtacct ggagcgagtg gacgagcagc atcgccgaaa
1441 gtatgcccgg cgtcccgtct aaaggtgttc tgcagatcca tggaaagctt cctgggaaac
1501 gtatgctagc agagcttctc cccgtgaatc atatttttaa gatccactct tagctggtaa
1561 atgaatttga atcgacatag tagccccata agcatcagcc ctgtagagtg aggagccatc
1621 tctagcgggc ccttcattcc tctccatgct gcaatcactg tcctgggctt atggtgctat
1681 ggactagggg tcctttgtga aagagcaaga tggagcaatg gagagaagac ctcttcctga
1741 atcactggac tccagaaatg tgcatgcaga tcagctgttg ccttcaagat ccagataaac
1801 tttcctgtca tgtgttagaa ctttattatt attaatattg ttaaacttct gtgctgttcc
1861 tgtgaatctc caaattttgt accttgttct aagctaatat atagcaatta aaaagagaga
1921 aaga
//