LOCUS AK303776 904 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55874 complete cds, highly similar to Homo
sapiens pentatricopeptide repeat domain 2 (PTCD2), mRNA.
ACCESSION AK303776
VERSION AK303776.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 904)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..904
/clone="TLIVE2004600"
/clone_lib="TLIVE2"
/db_xref="H-InvDB:HIT000498400"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="liver, tumor tissue"
CDS 16..501
/codon_start=1
/note="highly similar to Homo sapiens pentatricopeptide
repeat domain 2 (PTCD2), mRNA"
/protein_id="BAH14048.1"
/transl_table=1
/translation="MVRDSMAAAFRPSNRVLLQALQILVYPGVGGSGSVSCRCPLGAK
RYLLTDNVVKLKEFQQKKVAVACNLSGTKETYFRNLKKKLTQNKLILKGELITLLHLC
ESRDHVELAKNVIYRYHAENKNFTLGEYKFGPLFVRLCYELDLEESAVELMKDQVLCK
Y"
BASE COUNT 282 a 162 c 211 g 249 t
ORIGIN
1 gttccagtag ttggtatggt ccgagacagt atggctgctg catttcggcc ctcgaatcga
61 gttctcctgc aggcgctgca gattttggtg tatcctgggg tgggaggctc cggctctgtc
121 agctgccgct gccctctcgg agctaaaaga tacctactta cagataatgt ggtgaaatta
181 aaagaatttc aacaaaagaa agtggctgtt gcatgtaatc tttctggcac taaagaaacg
241 tattttagaa acttgaaaaa gaaactgacc cagaacaagc tcatcttgaa gggggagttg
301 ataaccttac tacatttgtg tgagtctcgg gaccatgtgg aactggctaa aaatgtcatt
361 tacaggtacc atgcagagaa caaaaatttc actttggggg agtataaatt tggaccgctt
421 tttgtgaggt tgtgttacga gttggatctc gaggaatctg cagtggagct catgaaagac
481 caggtgcttt gcaagtattg atagagatga aaaaccaaga tgtgaagttc accaaagata
541 cctatgttct tgcttttgca atttgctaca aactgaatag ccctgagtct ttcaaaatct
601 gtactacatt aagagaagaa gctctactca aaggagaaat tctctccagg agagcatcct
661 gtttcgctgt ggcattagct ctgaatcaga atgagatggc aaaagctgtg tccatttttt
721 ctcaaatcat gaatccagaa agcatagcct gcattaattt aaatattata atccatatcc
781 agtcaaatat gttggaaaac ctgataaaga ctctaaaaaa tgctgcagaa ggaaatttat
841 caaaatttgt gaaaagacat gtgttctcgg aggaagtgct ggccaaagtg agggaaaaag
901 tgaa
//