LOCUS AK303757 1441 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50348 complete cds, highly similar to Orphan
nuclear receptor NR1I3.
ACCESSION AK303757
VERSION AK303757.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1441)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1441
/clone="TLIVE2001566"
/clone_lib="TLIVE2"
/db_xref="H-InvDB:HIT000498381"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="liver, tumor tissue"
CDS 144..1037
/codon_start=1
/note="highly similar to Orphan nuclear receptor NR1I3"
/protein_id="BAH14039.1"
/transl_table=1
/translation="MLPKRSRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLD
AGMRKDMILSAEALALRRARQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQ
FVQFRPPAHLFIHHQPLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIED
QISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVGFQVEFLELLFHFHG
TLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRD
RYGGTLKAWRPHQGRKGLVKH"
BASE COUNT 337 a 392 c 344 g 368 t
ORIGIN
1 agacatctct tgttttccag atactacggg tcataatccc taactccaat cactggcaac
61 tcctgagatc agaggaaaac cagcaacagc gtgggagttt ggggagaggc attccatacc
121 agattctgtg gcctgcaggt gacatgctgc ctaagagaag caggagaaca gtcagcaaaa
181 gcattggtcc cacctgcccc tttgctggaa gctgtgaagt cagcaagact cagaggcgcc
241 actgcccagc ctgcaggttg cagaagtgct tagatgctgg catgaggaaa gacatgatac
301 tgtcggcaga agccctggca ttgcggcgag caaggcaggc ccagcggcgg gcacagcaaa
361 cacctgtgca actgagtaag gagcaagaag agctgatccg gacactcctg ggggcccaca
421 cccgccacat gggcaccatg tttgaacagt ttgtgcagtt taggcctcca gctcatctgt
481 tcatccatca ccagcccttg cccaccctgg cccctgtgct gcctctggtc acacacttcg
541 cagacatcaa cactttcatg gtactgcaag tcatcaagtt tactaaggac ctgcctgtct
601 tccgttccct gcccattgaa gaccagatct cccttctcaa gggagcagct gtggaaatct
661 gtcacatcgt actcaatacc actttctgtc tccaaacaca aaacttcctc tgcgggcctc
721 ttcgctacac aattgaagat ggagcccgtg tggggttcca ggtagagttt ttggagttgc
781 tctttcactt ccatggaaca ctacgaaaac tgcagctcca agagcctgag tatgtgctct
841 tggctgccat ggccctcttc tctcctgacc gacctggagt tacccagaga gatgagattg
901 atcagctgca agaggagatg gcactgactc tgcaaagcta catcaagggc cagcagcgaa
961 ggccccggga tcggtacggt gggacactga aggcttggag gccacaccag ggcaggaagg
1021 ggttggtgaa acattgagct tgggaggaat gtttttttac tgtcctttcc ttagggaatt
1081 caggtatctt ggggtctagt ccttccccct ggccatccct gtctcacatc gtttcagcat
1141 ccaaattgct gtatttggat actgctgttt catctcactt tttccagatt ttttttttat
1201 tcagtacaga tgcaaagtag tagctcagag gctctgggta atagcattcc tgagattgat
1261 gacatccatt acctcactag tccaacttct ccagactaat gcagactttt ctcttccctt
1321 ggcctttcct ctcctcgcca ttgggccaat tccttcgatt tctcatttcc cttgaagtta
1381 gggccattca cagtttcatg gtcaaagcca gttccaggtt caatagtctg tgatttatcc
1441 a
//