LOCUS AK303736 2713 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55374 complete cds, highly similar to Protein
kinase C-binding protein NELL1 precursor.
ACCESSION AK303736
VERSION AK303736.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2713)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2713
/clone="TKIDN2016541"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000498360"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 143..2404
/codon_start=1
/note="highly similar to Protein kinase C-binding protein
NELL1 precursor"
/protein_id="BAG64709.1"
/transl_table=1
/translation="MPMDLILVVWFCVCTARTVVGFGMDPDLQMDIVTELDLVNTTLG
VAQVSGMHNASKAFLFQDIEREIHAAPHVSEKLIQLFQNKSEFTILATVQQKPSTSGV
ILSIRELEHRIYERVIDPPDTDLPPGINLWLGQRNQKHGLFKGIIQDGKIIFMPNGYI
TQCPNLNHTCPTCSDFLSLVQGIMDLQELLAKMTAKLNYAETRLSQLENCHCEKTCQV
SGLLYRDQDSWVDGDHCRNCTCKSGAVECRRMSCPPLNCSPDSLPVHIAGQCCKVCRP
KCIYGGKVLAEGQRILTKSCRECRGGVLVKITEMCPPLNCSEKDHILPENQCCRVCRG
HNFCAEGPKCGENSECKNWNTKATCECKSGYISVQGDSAYCEDIDECAAKMHYCHANT
VCVNLPGLYRCDCVPGYIRVDDFSCTEHDECGSGQHNCDENAICTNTVQGHSCTCKPG
YVGNGTICRAFCEEGCRYGGTCVAPNKCVCPSGFTGSHCEKDIDECSEGIIECHNHSR
CVNLPGWYHCECRSGFHDDGTYSLSGESCIDIDECALRTHTCWNDSACINLAGGFDCL
CPSGPSCSGDCPHEGGLKHNGQVWTLKEDRCSVCSCKDGKIFCRRTACDCQNPSADLF
CCPECDTRVTSQCLDQNGHKLYRSGDNWTHSCQQCRCLEGEVDCWPLTCPNLSCEYTA
ILEGECCPRCVSDPCLADNITYDIRKTCLDSYGVPRLSGSVWTMAGSPCTTCKCKNGR
VCCSVDFECLQNN"
BASE COUNT 696 a 618 c 692 g 707 t
ORIGIN
1 agcacccggc gctgccgagc cacctccccc gccgcccgct agcaagtttg gcggctccaa
61 gccaggcgcg cctcaggatc caggctcatt tgcttccacc tagcttcggt gcccccctgc
121 taggcgggga ccctcgagag cgatgccgat ggatttgatt ttagttgtgt ggttctgtgt
181 gtgcactgcc aggacagtgg tgggctttgg gatggaccct gaccttcaga tggatatcgt
241 caccgagctt gaccttgtga acaccaccct tggagttgct caggtgtctg gaatgcacaa
301 tgccagcaaa gcatttttat ttcaagacat agaaagagag atccatgcag ctcctcatgt
361 gagtgagaaa ttaattcagc tgttccagaa caagagtgaa ttcaccattt tggccactgt
421 acagcagaag ccatccactt caggagtgat actgtccatt cgagaactgg agcacaggat
481 ttatgagcgt gtgatagacc ctccagatac cgaccttccc ccaggaatca atttatggct
541 tggccagcgc aaccaaaagc atggcttatt caaagggatc atccaagatg ggaagatcat
601 ctttatgccg aatggatata taacacagtg tccaaatcta aatcacactt gcccaacctg
661 cagtgatttc ttaagcctgg tgcaaggaat aatggattta caagagcttt tggccaagat
721 gactgcaaaa ctaaattatg cagagacaag acttagtcaa ttggaaaact gtcattgtga
781 gaagacttgt caagtgagtg gactgctcta tcgagatcaa gactcttggg tagatggtga
841 ccattgcagg aactgcactt gcaaaagtgg tgccgtggaa tgccgaagga tgtcctgtcc
901 ccctctcaat tgctccccag actccctccc agtgcacatt gctggccagt gctgtaaggt
961 ctgccgacca aaatgtatct atggaggaaa agttcttgca gaaggccagc ggattttaac
1021 caagagctgt cgggaatgcc gaggtggagt tttagtaaaa attacagaaa tgtgtcctcc
1081 tttgaactgc tcagaaaagg atcacattct tcctgagaat cagtgctgcc gtgtctgtag
1141 aggtcataac ttttgtgcag aaggacctaa atgtggtgaa aactcagagt gcaaaaactg
1201 gaatacaaaa gctacttgtg agtgcaagag tggttacatc tctgtccagg gagactctgc
1261 ctactgtgaa gatattgatg agtgtgcagc taagatgcat tactgtcatg ccaatactgt
1321 gtgtgtcaac cttcctgggt tatatcgctg tgactgtgtc ccaggataca ttcgtgtgga
1381 tgacttctct tgtacagaac acgatgaatg tggcagcggc cagcacaact gtgatgagaa
1441 tgccatctgc accaacactg tccagggaca cagctgcacc tgcaaaccgg gctacgtggg
1501 gaacgggacc atctgcagag ctttctgtga agagggctgc agatacggtg gaacgtgtgt
1561 ggctcccaac aaatgtgtct gtccatctgg attcacagga agccactgcg agaaagatat
1621 tgatgaatgt tcagagggaa tcattgagtg ccacaaccat tcccgctgcg ttaacctgcc
1681 agggtggtac cactgtgagt gcagaagcgg tttccatgac gatgggacct attcactgtc
1741 cggggagtcc tgtattgaca ttgatgaatg tgccttaaga actcacacct gttggaacga
1801 ttctgcctgc atcaacctgg cagggggttt tgactgtctc tgcccctctg ggccctcctg
1861 ctctggtgac tgtcctcatg aaggggggct gaagcacaat ggccaggtgt ggaccttgaa
1921 agaagacagg tgttctgtct gctcctgcaa ggatggcaag atattctgcc gacggacagc
1981 ttgtgattgc cagaatccaa gtgctgacct attctgttgc ccagaatgtg acaccagagt
2041 cacaagtcaa tgtttagacc aaaatggtca caagctgtat cgaagtggag acaattggac
2101 ccatagctgt cagcagtgtc ggtgtctgga aggagaggta gattgctggc cactcacttg
2161 ccccaacttg agctgtgagt atacagctat cttagaaggg gaatgttgtc cccgctgtgt
2221 cagtgacccc tgcctagctg ataacatcac ctatgacatc agaaaaactt gcctggacag
2281 ctatggtgtt ccacggctta gtggctcagt gtggacgatg gctggatctc cctgcacaac
2341 ctgtaaatgc aagaatggaa gagtctgttg ttctgtggat tttgagtgtc ttcaaaataa
2401 ttgaagtatt tacagtggac tcaacgcaga agaatggacg aaatgaccat ccaacgtgat
2461 taaggatagg aatcggtagt ttggtttttt tgtttgtttt gtttttttaa ccacagataa
2521 ttgccaaagt ttccacctga ggacggtgtt tggaggttgc cttttggacc taccactttg
2581 ctcattcttg ctaacctagt ctaggtgacc tacagtgccg tgcatttaag tcaatggttg
2641 ttaaaagaag tttcccgtgt tgtaaatcat gtttccctta tcagatcatt tgcaaataca
2701 tttaaatgat ctc
//