LOCUS AK303730 2663 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61030 complete cds, highly similar to
Toll-like receptor 4 precursor.
ACCESSION AK303730
VERSION AK303730.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2663)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2663
/clone="TKIDN2015467"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000498354"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 563..2482
/codon_start=1
/note="highly similar to Toll-like receptor 4 precursor"
/protein_id="BAG64706.1"
/transl_table=1
/translation="MPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMK
TCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIID
LFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTS
NKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNF
LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL
KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS
LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDSACTCEHQSFLQ
WIKDQRQLLVEVERMECATPSDKQGMPVLSLNITCQMNKTIIGVSVLSVLVVSVVAVL
VYKFYFHLMLLAGCIKYGRGENIYDAFVIYSSQDEDWVRNELVKNLEEGVPPFQLCLH
YRDFIPGVAIAANIIHEGFHKSRKVIVVVSQHFIQSRWCIFEYEIAQTWQFLSSRAGI
IFIVLQKVEKTLLRQQVELYRLLSRNTYLEWEDSVLGRHIFWRRLRKALLDGKSWNPE
GTVGTGCNWQEATSI"
BASE COUNT 738 a 574 c 586 g 765 t
ORIGIN
1 aattgctgtg gggcggctcg aggaagagaa gacaccagtg cctcagaaac tgctcggtca
61 gacggtgata gcgagccacg cattcacagg gccactgctg ctcacagaag cagtgaggat
121 gatgccagga tgatgtctgc ctcgcgcctg gctgggactc tgatcccagc catggccttc
181 ctctcctgcg tgagaccaga aagctgggag ccctgcgtgg aggtgtgaaa tccagacaat
241 tgaagatggg gcatatcaga gcctaagcca cctctctacc ttaatattga caggaaaccc
301 catccagagt ttagccctgg gagccttttc tggactatca agtttacaga agctggtggc
361 tgtggagaca aatctagcat ctctagagaa cttccccatt ggacatctca aaactttgaa
421 agaacttaat gtggctcaca atcttatcca atctttcaaa ttacctgagt atttttctaa
481 tctgaccaat ctagagcact tggacctttc cagcaacaag attcaaagta tttattgcac
541 agacttgcgg gttctacatc aaatgcccct actcaatctc tctttagacc tgtccctgaa
601 ccctatgaac tttatccaac caggtgcatt taaagaaatt aggcttcata agctgacttt
661 aagaaataat tttgatagtt taaatgtaat gaaaacttgt attcaaggtc tggctggttt
721 agaagtccat cgtttggttc tgggagaatt tagaaatgaa ggaaacttgg aaaagtttga
781 caaatctgct ctagagggcc tgtgcaattt gaccattgaa gaattccgat tagcatactt
841 agactactac ctcgatgata ttattgactt atttaattgt ttgacaaatg tttcttcatt
901 ttccctggtg agtgtgacta ttgaaagggt aaaagacttt tcttataatt tcggatggca
961 acatttagaa ttagttaact gtaaatttgg acagtttccc acattgaaac tcaaatctct
1021 caaaaggctt actttcactt ccaacaaagg tgggaatgct ttttcagaag ttgatctacc
1081 aagccttgag tttctagatc tcagtagaaa tggcttgagt ttcaaaggtt gctgttctca
1141 aagtgatttt gggacaacca gcctaaagta tttagatctg agcttcaatg gtgttattac
1201 catgagttca aacttcttgg gcttagaaca actagaacat ctggatttcc agcattccaa
1261 tttgaaacaa atgagtgagt tttcagtatt cctatcactc agaaacctca tttaccttga
1321 catttctcat actcacacca gagttgcttt caatggcatc ttcaatggct tgtccagtct
1381 cgaagtcttg aaaatggctg gcaattcttt ccaggaaaac ttccttccag atatcttcac
1441 agagctgaga aacttgacct tcctggacct ctctcagtgt caactggagc agttgtctcc
1501 aacagcattt aactcactct ccagtcttca ggtactaaat atgagccaca acaacttctt
1561 ttcattggat acgtttcctt ataagtgtct gaactccctc caggttcttg attacagtct
1621 caatcacata atgacttcca aaaaacagga actacagcat tttccaagta gtctagcttt
1681 cttaaatctt actcagaatg actctgcttg tacttgtgaa caccagagtt tcctgcaatg
1741 gatcaaggac cagaggcagc tcttggtgga agttgaacga atggaatgtg caacaccttc
1801 agataagcag ggcatgcctg tgctgagttt gaatatcacc tgtcagatga ataagaccat
1861 cattggtgtg tcggtcctca gtgtgcttgt agtatctgtt gtagcagttc tggtctataa
1921 gttctatttt cacctgatgc ttcttgctgg ctgcataaag tatggtagag gtgaaaacat
1981 ctatgatgcc tttgttatct actcaagcca ggatgaggac tgggtaagga atgagctagt
2041 aaagaattta gaagaagggg tgcctccatt tcagctctgc cttcactaca gagactttat
2101 tcccggtgtg gccattgctg ccaacatcat ccatgaaggt ttccataaaa gccgaaaggt
2161 gattgttgtg gtgtcccagc acttcatcca gagccgctgg tgtatctttg aatatgagat
2221 tgctcagacc tggcagtttc tgagcagtcg tgctggtatc atcttcattg tcctgcagaa
2281 ggtggagaag accctgctca ggcagcaggt ggagctgtac cgccttctca gcaggaacac
2341 ttacctggag tgggaggaca gtgtcctggg gcggcacatc ttctggagac gactcagaaa
2401 agccctgctg gatggtaaat catggaatcc agaaggaaca gtgggtacag gatgcaattg
2461 gcaggaagca acatctatct gaagaggaaa aataaaaacc tcctgaggca tttcttgccc
2521 agctgggtcc aacacttgtt cagttaataa gtattaaatg ctgccacatg tcaggcctta
2581 tgctaagggt gagtaattcc atggtgcact agatatgcag ggctgctaat ctcaaggagc
2641 ttccagtgca gagggaataa atg
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