LOCUS AK303715 2242 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53267 complete cds, highly similar to
Optineurin.
ACCESSION AK303715
VERSION AK303715.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2242)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2242
/clone="TKIDN2010440"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000498339"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 422..1984
/codon_start=1
/note="highly similar to Optineurin"
/protein_id="BAG64696.1"
/transl_table=1
/translation="MKLNNQAMKGRFEELSAWTEKQKEERQFFEIQSKEAKERLMALS
HENEKLKEELGKLKGKSERSSEDPTDDSRLPRAEAEQEKDQLRTQVVRLQAEKADLLG
IVSELQLKLNSSGSSEDSFVEIRMAEGEAEGSVKEIKHSPGPTRTVSTGTALSKYRSR
SADGAKNYFEHEELTVSQLLLCLREGNQKVERLEVALKEAKERVSDFEKKTSNRSEIE
TQTEGSTEKENDEEKGPETVGSEVEALNLQVTSLFKELQEAHTKLSEAELMKKRLQEK
CQALERKNSAIPSELNEKQELVYTNKKLELQVESMLSEIKMEQAKTEDEKSKLTVLQM
THNKLLQEHNNALKTIEELTRKESEKVDRAVLKELSEKLELAEKALASKQLQMDEMKQ
TIAKQEEDLETMTILRAQMEVYCSDFHAERAAREKIHEEKEQLALQLAVLLKENDAFE
DGGRQSLMEMQSRHGARTSDSDQQAYLVQRGAEDRDWRQQRNIPIHSCPKCGEVLPDI
DTLQIHVMDRII"
BASE COUNT 705 a 490 c 604 g 443 t
ORIGIN
1 accccagtcc cggctgcccc ctccgccacc gccgccgccc gccggcaggt tccctggtca
61 gcgtcccatc ccggtcggga gttctctcca ggcggcacga tgccgaggaa acagtgaccc
121 tgagcgaagc caagccgggc ggcaggaact tctgcaatgt cccatcaacc tctcagctgc
181 ctcactgaaa aggaggacag ccccagtgaa agcacaggaa atggaccccc ccacctggcc
241 cacccaaacc tggacacgtt taccccggag gagctgctgc agcagatgaa agagctcctg
301 accgagaacc accagctgaa agagccatgt ggtcaagtgg actagaggga gatttggttc
361 atcagatcaa gtccactttc ctggtgtgtg actccatcac tctgaacctc ctgcagaagc
421 catgaagcta aataatcaag ccatgaaagg gagatttgag gagctttcgg cctggacaga
481 gaaacagaag gaagaacgcc agttttttga gatacagagc aaagaagcaa aagagcgtct
541 aatggccttg agtcatgaga atgagaaatt gaaggaagag cttggaaaac taaaagggaa
601 atcagaaagg tcatctgagg accccactga tgactccagg cttcccaggg ccgaagcgga
661 gcaggaaaag gaccagctca ggacccaggt ggtgaggcta caagcagaga aggcagacct
721 gttgggcatc gtgtctgaac tgcagctcaa gctgaactcc agcggctcct cagaagattc
781 ctttgttgaa attaggatgg ctgaaggaga agcagaaggg tcagtaaaag aaatcaagca
841 tagtcctggg cccacgagaa cagtctccac tggcacggca ttgtctaaat ataggagcag
901 atctgcagat ggggccaaga attacttcga acatgaggag ttaactgtga gccagctcct
961 gctgtgccta agggaaggga atcagaaggt ggagagactt gaagttgcac tcaaggaggc
1021 caaagaaaga gtttcagatt ttgaaaagaa aacaagtaat cgttctgaga ttgaaaccca
1081 gacagagggg agcacagaga aagagaatga tgaagagaaa ggcccggaga ctgttggaag
1141 cgaagtggaa gcactgaacc tccaggtgac atctctgttt aaggagcttc aagaggctca
1201 tacaaaactc agcgaagctg agctaatgaa gaagagactt caagaaaagt gtcaggccct
1261 tgaaaggaaa aattctgcaa ttccatcaga gttgaatgaa aagcaagagc ttgtttatac
1321 taacaaaaag ttagagctac aagtggaaag catgctatca gaaatcaaaa tggaacaggc
1381 taaaacagag gatgaaaagt ccaaattaac tgtgctacag atgacacaca acaagcttct
1441 tcaagaacat aataatgcat tgaaaacaat tgaggaacta acaagaaaag agtcagaaaa
1501 agtggacagg gcagtgctga aggaactgag tgaaaaactg gaactggcag agaaggctct
1561 ggcttccaaa cagctgcaaa tggatgaaat gaagcaaacc attgccaagc aggaagagga
1621 cctggaaacc atgaccatcc tcagggctca gatggaagtt tactgttctg attttcatgc
1681 tgaaagagca gcgagagaga aaattcatga ggaaaaggag caactggcat tgcagctggc
1741 agttctgctg aaagagaatg atgctttcga agacggaggc aggcagtcct tgatggagat
1801 gcagagtcgt catggggcga gaacaagtga ctctgaccag caggcttacc ttgttcaaag
1861 aggagctgag gacagggact ggcggcaaca gcggaatatt ccgattcatt cctgccccaa
1921 gtgtggagag gttctgcctg acatagacac gttacagatt cacgtgatgg atcgcatcat
1981 ttaagtgttg atgtatcacc tccccaaaac tgttggtaaa tgtcagattt tttcctccaa
2041 gagttgtgct tttgtgttat ttgttttcac tcaaatattt tgcctcatta ttcttgtttt
2101 aaaagaaaga aaacaggccg ggcacagtgg ctcatgcctg taatcccagc actttgggag
2161 gtcgaggtgg gtggatcact tggggtcagg gtttgagacc agcctggcca acatggcgga
2221 accctgtctc taccaaaatt ac
//