LOCUS AK303706 1976 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52386 complete cds, highly similar to
Bardet-Biedl syndrome 4 protein.
ACCESSION AK303706
VERSION AK303706.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1976)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1976
/clone="TKIDN2007392"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000498330"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 514..1557
/codon_start=1
/note="highly similar to Bardet-Biedl syndrome 4 protein"
/protein_id="BAG64690.1"
/transl_table=1
/translation="MLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLG
IYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWN
NIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAIN
FQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKN
ALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPKSKHQ
TTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPEPAVE
SSPTETSEQIREK"
BASE COUNT 577 a 460 c 474 g 465 t
ORIGIN
1 aaaaaccgcc gacttccggc cgcgcagcgg tgggctgagc taaaatggct gaggagagag
61 tcgcgacgct ccagagtttc ctattttgga gaagcagaac tggttgattc atcttcatta
121 tatccggaaa gattatgaag cctgcaaggc tgttatcaaa gaacagcttc aagagactca
181 gggattgtgt gaatatgcta tctatgtcca agcattgata tttcgcctag aaggaaatat
241 ccaagaatcc ctagaactct tccagacatg tgcagttctt agtcctcaga gtgctgataa
301 cctcaagcag gtggccagat ctttatttct tttgggaaaa cataaagctg ccattgaagt
361 atataatgaa gcagctaaac tcaaccagaa agattggcct aggagatcag ccataaccta
421 ggagtttgct acatatacct gaagcagttc aacaaggcac aagaccagtt gcacaatgcc
481 ctgaatctta ataggcacga tctgacttat ataatgctgg ggaagatcca cttgctggag
541 ggagacttgg acaaggccat tgaagtctac aagaaagcag tggagttctc accagaaaat
601 acagagcttc ttacaacttt aggattactc tacttacagc tcggcatcta ccagaaggca
661 tttgaacatc ttggcaatgc actgacttat gaccctacca actacaaggc catcttggca
721 gcaggcagca tgatgcagac ccacggggac tttgatgttg ccctcaccaa atacagagtt
781 gtggcttgtg ctgttccaga aagtcctcca ctctggaata acattggaat gtgtttcttt
841 ggcaagaaga aatatgtggc ggccatcagc tgcctgaaac gagccaacta cttggcaccc
901 ttcgattgga agattctgta taatttgggc cttgtccatt tgaccatgca gcagtatgca
961 tcagcttttc attttctcag tgcggccatc aacttccagc caaagatggg ggagctctac
1021 atgctcttgg cagtggctct gaccaatctg gaagatatag aaaatgccaa gagagcctac
1081 gcagaagcag tccacctgga taagtgtaac cctttagtaa acctgaacta tgctgtgctg
1141 ctgtacaacc agggcgagaa gaagaacgcc ctggcccaat atcaggagat ggagaagaaa
1201 gtcagcctac tcaaggacaa tagctctctg gaatttgact ctgagatggt ggagatggct
1261 cagaagttgg gagctgctct ccaggttggg gaggcactgg tctggaccaa accagttaaa
1321 gatcccaaat caaagcacca gaccacttca accagcaaac ctgccagttt ccagcagcct
1381 ctgggctcta atcaagctct aggacaggca atgtcttcag cagctgcata caggacgctc
1441 ccctcaggtg ctggaggaac atcccagttc acaaagcccc catctcttcc tctggagcca
1501 gagcctgcgg tggaatcaag tccaactgaa acatcagaac aaataagaga gaaataagaa
1561 tagaatgaat gaccccaaaa tagggttttc ttgggcgagg atgtgctgga ttaggaaagg
1621 tgacatgaca caggcagagc agagtggcac ccaccacaga atacagtgtg tgttattacg
1681 aggagccagc agttgagcct aaggtccttc tacctacctg gtattggcat ttgaggtcgg
1741 aaaccctcta ctgccccata agccaggaaa agtgaaaaga gaacacagtt cctttaagaa
1801 ctggcagcaa ggcttgaggc cttatgtatg tagctgagtc agcaaggtac atgatgctgt
1861 ctgctttcaa aaggactttt ctctcctagc tgactgactc cttccttagt tcaaggaaca
1921 gctgagacag acctctgctg agtagctctg tgatgacaaa gccttggttt aactga
//