LOCUS AK303694 2061 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53485 complete cds, highly similar to
Autophagy-related protein 7.
ACCESSION AK303694
VERSION AK303694.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2061)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2061
/clone="TKIDN2005124"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000498318"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 45..1916
/codon_start=1
/note="highly similar to Autophagy-related protein 7"
/protein_id="BAG64682.1"
/transl_table=1
/translation="MAAATGDPGLSKLQFAPFSSALDVGFWHELTQKKLNEYRLDEAP
KDIKGYYYNGDSAGLPARLTLEFSAFDMSAPTPARCCPAIGTLYNTNTLESFKTADKK
LLLEQAANEIWESIKSGTALENPVLLNKFLLLTFAIEALECAYDNLCQTEGVTALPYF
LIKYDENMVLASLLKHYSDFFQGQRTKITIGVYDPCNLAQYPGWPLRNFLVLAAHRWS
SSFQSVEVVCFRDRTMQGARDVAHSIIFEVKLPEMAFSPDCPKAVGWEKNQKGGMGPR
MVNLSECMDPKRLAESSVDLNLKLMCWRLVLTLDLDKVVSVKCLLLGAGTLGCNVART
LMGWGVRHITFVDNAKISYSNPVRQPLYEFEDCLGGGKPKALAAADRLQKIFPGVNAR
GFNMSIPMPGHPVNFSSVTLEQARRDVEQLEQLIESHDVVFLLMDTRESRWLPAVIAA
SKRKLVINAALGFDTFVVMRHGLKKPKQQGAGDLCPNHPVASADLLGSSLFANIPGYK
LGCYFCNDVVAPGDSTRDRTLDQQCTVSRPGLAVIAGALAVELMVSVLQHPEGGYAIA
SSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSSKIWDMSDDETI"
BASE COUNT 493 a 500 c 549 g 519 t
ORIGIN
1 agagagagct gtggttgccg gaagttgagc ggcggcaaga aataatggcg gcagctacgg
61 gggatcctgg actctctaaa ctgcagtttg ccccttttag tagtgccttg gatgttgggt
121 tttggcatga gttgacccag aagaagctga acgagtatcg gctggatgaa gctcccaagg
181 acattaaggg ttattactac aatggtgact ctgctgggct gccagctcgc ttaacattgg
241 agttcagtgc ttttgacatg agtgctccca ccccagcccg ttgctgccca gctattggaa
301 cactgtataa caccaacaca ctcgagtctt tcaagactgc agataagaag ctccttttgg
361 aacaagcagc aaatgagata tgggaatcca taaaatcagg cactgctctt gaaaaccctg
421 tactcctcaa caagttcctc ctcttgacat ttgcaattga agcactagag tgtgcatatg
481 ataatctttg tcaaacagaa ggagtcacag ctcttcctta cttcttaatc aagtatgatg
541 agaacatggt gctggcttcc ttgcttaaac actacagtga tttcttccaa ggtcaaagga
601 cgaagataac aattggtgta tatgatccct gtaacttagc ccagtaccct ggatggcctt
661 tgaggaattt tttggtccta gcagcccaca gatggagtag cagtttccag tctgttgaag
721 ttgtttgctt ccgtgaccgt accatgcagg gggcgagaga cgttgcccac agcatcatct
781 tcgaagtgaa gcttccagaa atggcattta gcccagattg tcctaaagca gttggatggg
841 aaaagaacca gaaaggaggc atgggaccaa ggatggtgaa cctcagtgaa tgtatggacc
901 ctaaaaggtt agctgagtca tcagtggatc taaatctcaa actgatgtgt tggagattgg
961 ttcttacttt agacttggac aaggttgtgt ctgtcaaatg tctgctgctt ggagccggca
1021 ccttgggttg caatgtagct aggacgttga tgggttgggg cgtgagacac atcacatttg
1081 tggacaatgc caagatctcc tactccaatc ctgtgaggca gcctctctat gagtttgaag
1141 attgcctagg gggtggtaag cccaaggctc tggcagcagc ggaccggctc cagaaaatat
1201 tccccggtgt gaatgccaga ggattcaaca tgagcatacc tatgcctggg catccagtga
1261 acttctccag tgtcactctg gagcaagccc gcagagatgt ggagcaactg gagcagctca
1321 tcgaaagcca tgatgtcgtc ttcctattga tggacaccag ggagagccgg tggcttcctg
1381 ccgtcattgc tgcaagcaag agaaagctgg tcatcaatgc tgctttggga tttgacacat
1441 ttgttgtcat gagacatggt ctgaagaaac caaagcagca aggagctggg gacttgtgtc
1501 caaaccaccc tgtggcatct gctgacctcc tgggctcatc gctttttgcc aacatccctg
1561 gttacaagct tggctgctac ttctgcaatg atgtggtggc cccaggagat tcaaccagag
1621 accggacctt ggaccagcag tgcactgtga gtcgtccagg actggccgtg attgcaggag
1681 ccctggccgt ggaattgatg gtatctgttt tgcagcatcc agaagggggc tatgccattg
1741 ccagcagcag tgacgatcgg atgaatgagc ctccaacctc tcttgggctt gtgcctcacc
1801 agatccgggg atttctttca cggtttgata atgtccttcc cgtcagcctg gcatttgaca
1861 aatgtacagc ttgttcttcc aaaatctggg acatgagcga tgatgagacc atctgagatg
1921 gccccgctgt ggggctgact tctccctggc cgcctgctga ggagctctcc atcgccagag
1981 caggactgct gaccccaggc ctggtgattc tgggcccctc ctccataccc cgaggtctgg
2041 gattcccccc tctgctgccc a
//