LOCUS AK303677 1673 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61743 complete cds, highly similar to Class B
basic helix-loop-helix protein 3.
ACCESSION AK303677
VERSION AK303677.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1673)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1673
/clone="TKIDN2000833"
/clone_lib="TKIDN2"
/db_xref="H-InvDB:HIT000498301"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="kidney, tumor tissue"
CDS 131..1243
/codon_start=1
/note="highly similar to Class B basic helix-loop-helix
protein 3"
/protein_id="BAH14012.1"
/transl_table=1
/translation="MDEGIPHLQERQLLEHRDFIGLDYSSLYMCKPKRSMKRDDTKDT
YKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTAL
TEQQHQKIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLSRFESWTPREPRCV
QLINHLHAVATQFLPTPQLLTQQVPLSKGTGAPSAAGSAAAPCLERAGQKLEPLAYCV
PVIQRTQPSAELAAENDTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPP
PPPRSPACPRCCRPLPRRRAPPPRPSCRTRWRPLGRRTPSTRTAAPTCPSPGPASRGT
RRALLRKIPRSQERKLPESLRPEGRRFKQSEKLKYP"
BASE COUNT 437 a 485 c 434 g 317 t
ORIGIN
1 actgaagagg gagagcgaga gagagactgg agacgcacag atccccccaa ggtctcccaa
61 gcctaccgtc ccacagatta ttgtacagag ccccaaaaat cgaaacagag gaaacgaaca
121 gcagttgaac atggacgaag gaattcctca tttgcaagag agacagttac tggaacatag
181 agattttata ggactggact attcctcttt gtatatgtgt aaacccaaaa ggagcatgaa
241 acgagacgac accaaggata cctacaaatt accgcacaga ttaatagaaa agaaaagaag
301 agaccgaatt aatgaatgca ttgctcagct gaaagattta ctgcctgaac atctgaaatt
361 gacaactctg ggacatctgg agaaagctgt agtcttggaa ttaactttga aacacttaaa
421 agctttaacc gccttaaccg agcaacagca tcagaagata attgctttac agaatgggga
481 gcgatctctg aaatcgccca ttcagtccga cttggatgcg ttccactcgg gatttcaaac
541 atgcgccaaa gaagtcttgc aatacctctc ccggtttgag agctggacac ccagggagcc
601 gcggtgtgtc cagctgatca accacttgca cgccgtggcc acccagttct tgcccacccc
661 gcagctgttg actcaacagg tccctctgag caaaggcacc ggcgctccct cggccgccgg
721 gtccgcggcc gccccctgcc tggagcgcgc ggggcagaag ctggagcccc tcgcctactg
781 cgtgcccgtc atccagcgga ctcagcccag cgccgagctc gccgccgaga acgacacgga
841 caccgacagc ggctacggcg gcgaagccga ggcccggccg gaccgcgaga aaggcaaagg
901 cgcgggggcg agccgcgtca ccatcaagca ggagcctccc ggggaggact cgccgccgcc
961 gccgccgcgt tcccctgcct gtcctcggtg ttgtcgcccc ctcccgagaa ggcgggcgcc
1021 gccgccgcga ccctcctgcc gcacgaggtg gcgccccttg gggcgccgca cccccagcac
1081 ccgcacggcc gcacccacct gcccttcgcc gggccccgcg agccggggaa cccggagagc
1141 tctgctcagg aagatccctc gcagccagga aaggaagctc cctgaatcct tgcgtcccga
1201 aggacggagg ttcaagcaga gtgagaagtt aaaataccct taaggaggtt caagcagagt
1261 gagaagttaa aataccctta aggtctttaa gggaggaagt gtaatagatg cacgacaggc
1321 ataaacaaga acaacaaaac aggtgttatg tgtacattcg gagttcctgt tttgctcatc
1381 ccgcaccacc ccaccctcca cacactaaca tccctttctt ccccccacca gctgtaaaag
1441 atcctatgcg aaagacactg gctctttttt ttaatccccc aaataaattt tgcccccttt
1501 taggccatgt tccattatct cttaaaattg gaacctaatt cgagaggaag taagaagggt
1561 ctgttctgtg gctgagctag gtgaaccccg gggtagggga aagatgttaa cacctttgac
1621 gtctttggag ttgacatgga acagcaggta gttgttatgt agagctagtt ctc
//