LOCUS AK303652 2652 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58084 complete cds, highly similar to
Receptor-type tyrosine-protein phosphatase mu precursor (EC
3.1.3.48).
ACCESSION AK303652
VERSION AK303652.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2652)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2652
/clone="THYMU3046154"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498276"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 2..2545
/codon_start=1
/note="highly similar to Receptor-type tyrosine-protein
phosphatase mu precursor (EC 3.1.3.48)"
/protein_id="BAG64655.1"
/transl_table=1
/translation="MRGLGTCLATLAGLLLTAAGETFSGGCLFDEPYSTCGYSQSEGD
DFNWEQVNTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYF
VSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFE
VITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRL
WLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAEL
VVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVD
STSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVK
SRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLS
PYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQ
TYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRAS
TAKGFGPPATNQFTTKISAPSMPAYELETSLNQTDNTVTVMLKPAHSRGAPVSVYQIV
VEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNK
TYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVATKGAATPKPVPEPEKQTDHT
VKIAGVIAGILLFVIIFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQ
GTNCDEAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPRYCYS"
BASE COUNT 759 a 622 c 621 g 650 t
ORIGIN
1 catgagggga cttgggactt gcctggcgac tttggccgga cttttgctaa ctgcggcggg
61 cgagacgttc tcaggtggct gcctctttga tgagccgtat agcacatgtg gatatagtca
121 atctgaaggt gatgacttca attgggagca agtgaacacc ttgactaaac cgacttctga
181 tccatggatg ccatcaggtt ctttcatgct ggtgaatgcc tctgggagac ctgaggggca
241 gagagcccac ctgctcttac cccaacttaa agaaaatgac acccactgca tcgattttca
301 ctattttgtg tccagcaaga gtaattctcc tccggggtta ctcaatgtct acgtgaaggt
361 caataacggg ccactgggga atcctatctg gaatatatct ggagacccaa cacgtacatg
421 gaacagggca gaactggcca ttagtacttt ctggcctaac ttttatcagg tgatttttga
481 agtgataact tctggacatc aaggctatct cgctatcgat gaggtgaagg tgttaggaca
541 tccatgtacc aggactcctc acttcctgcg gattcagaat gtggaagtta atgctggcca
601 gtttgctacc ttccagtgca gtgccatcgg caggaccgtg gcaggagaca ggctctggtt
661 acagggcatt gatgtgcgag atgctcctct gaaggaaatc aaggtgacca gctcccgacg
721 cttcattgct tcatttaatg ttgtgaatac caccaaacga gatgctggaa agtaccgctg
781 catgattcgc actgaaggag gtgttggaat atcaaactat gcagagttgg tagttaaaga
841 accacccgtt cctattgccc cacctcagct cgcctctgta ggagccacct acctgtggat
901 acagctcaac gccaactcca tcaatgggga tgggcccatt gtggcccgag aggtggagta
961 ctgcacggcc agtgggagct ggaatgaccg gcagccagtc gattccacga gctataaaat
1021 tggacacctt gacccagata cagaatatga gattagtgtg ctcctgacca ggccagggga
1081 gggtggcact ggctctcctg gtccagctct caggacaaga acaaagtgtg ctgatcccat
1141 gcgaggccca agaaaactag aagtagtgga ggtcaaatct cggcaaatca ctatccgctg
1201 ggagccattt ggatataatg taactcgttg ccacagttat aatctcactg tccactactg
1261 ttaccaagtt ggaggacaag aacaagtgcg agaagaagta agctgggata cagaaaattc
1321 acaccctcaa cacacgatca ctaacctgtc accatacacc aatgtcagtg tgaaactgat
1381 cctcatgaac ccagagggcc ggaaggaaag ccaagaactc atagtgcaga cagatgaaga
1441 cctcccaggt gctgttccca ctgaatccat acaaggaagt acctttgaag agaagatatt
1501 tcttcagtgg agagaaccaa ctcaaacata tggtgtaatc actttatatg agatcaccta
1561 caaagcagtc agttcctttg acccagaaat agatttatcc aatcagagtg gaagagtttc
1621 aaagctggga aatgaaaccc attttctgtt ttttggactg tatccgggga ccacatactc
1681 ctttaccatc cgagctagca cagctaaggg ttttgggcct ccagcaacaa accagttcac
1741 caccaaaata tcagcaccct ctatgccagc ttatgaactt gagacatctt tgaatcaaac
1801 tgacaatacc gtgacagtca tgctgaaacc tgcccacagc agaggagcac ctgtcagtgt
1861 ctatcaaata gttgttgagg aagaacgtcc tcgaagaact aaaaagacga cagaaatctt
1921 aaagtgctac ccagtgccaa ttcacttcca gaatgcttct ctgctgaact cacagtacta
1981 ctttgctgca gaatttcctg cagacagcct ccaagctgcg cagcctttta caattggtga
2041 taataagaca tataatggat actggaacac tccccttctc ccctataaaa gctacagaat
2101 ttatttccaa gctgctagta gagccaatgg ggaaaccaaa atagactgtg tccaagtggc
2161 cacaaaagga gctgccactc cgaaaccagt cccagaaccc gagaaacaga cagaccatac
2221 agttaaaatt gctggagtca tcgcgggcat cttgctgttc gtgattatat ttcttggagt
2281 tgtgttggta atgaagaaaa ggaaactggc caagaagcgg aaagagacca tgagcagcac
2341 ccgacaggag atgactgtga tggtgaactc aatggacaag agctatgctg agcagggcac
2401 aaactgcgac gaggctttct cattcatgga cacgcacaat ctgaatggga gatctgtgtc
2461 ttcaccatcg tccttcacaa tgaaaacaaa tacactgagc acatcggtgc ctaattccta
2521 ttaccctcgt tattgttaca gctgagtgta tgtttttgtt ctgtggagaa tgctatctgg
2581 cattatggta atatattatt ttaggtaata tttgtacttt aacatgttgc ataatatatg
2641 cttatgtagc tt
//