LOCUS AK303639 1440 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50338 complete cds, highly similar to Homo
sapiens pentatricopeptide repeat domain 2 (PTCD2), mRNA.
ACCESSION AK303639
VERSION AK303639.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1440)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1440
/clone="THYMU3045258"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498263"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 305..955
/codon_start=1
/note="highly similar to Homo sapiens pentatricopeptide
repeat domain 2 (PTCD2), mRNA"
/protein_id="BAH14003.1"
/transl_table=1
/translation="MWNWLKMSFTGALQVLIEMKNQDVKFTKDTYVLAFAICYKLNSP
ESFKICTTLREEALLKGEILSRRASCFAVALALNQNEMAKAVSIFSQIMNPESIACIN
LNIIIHIQSNMLENLIKTLKNAAEGNLSKFVKRHVFSEEVLAKVREKVKDVPALVAKF
DEIYGTLHITGQVTTDSLDAVLCHTPRDRKSHTLLLNKRMVSRRTFQPLSQSLLAE"
BASE COUNT 409 a 315 c 321 g 395 t
ORIGIN
1 atggctgctg catttcggcc ctcgaatcga gttctcctgc aggcgctgca gattttggtg
61 tatcctgggg tgggaggctc cggctctgtc agctgccgct gccctctcgg agctaaaaga
121 tacctactta cagataatgt ggtgaaatta aaagaatttc aacaaaagaa agtggctgtt
181 gcatgtaatc tttctggcac taaagaaacg tattttagaa acttgaaaaa gaaactgacc
241 cagaacaagc tcatcttgaa gggggagttg atgaccttac tacatttgtg tgagtctcgg
301 gaccatgtgg aactggctaa aaatgtcatt tacaggtgct ttgcaagtat tgatagagat
361 gaaaaaccaa gatgtgaagt tcaccaaaga tacctatgtt cttgcttttg caatttgcta
421 caaactgaat agccctgagt ctttcaaaat ctgtactaca ttaagagaag aagctctact
481 caaaggagaa attctctcca ggagagcatc ctgtttcgct gtggcattag ctctgaatca
541 gaatgagatg gcaaaagctg tgtccatttt ttctcaaatc atgaatccag aaagcatagc
601 ctgcattaat ttaaatatta taatccatat ccagtcaaat atgttggaaa acctgataaa
661 gactctaaaa aatgctgcag aaggaaattt atcaaaattt gtgaaaagac atgtgttctc
721 ggaggaagtg ctggccaaag tgagggaaaa agtgaaggat gtgcctgccc ttgtggccaa
781 atttgatgag atctatggga cactgcacat cactggccag gtcaccactg attctttgga
841 tgctgtgctc tgccacaccc ccagggacag gaaatctcac acgttgctat taaacaagag
901 gatggtcagc cgtcgcacct tccagccact cagccagtcc ctgttggctg agtaaccctg
961 gtttcagtcc acctatggat ctgaggggcc tgcttctagt gagttattac ctttcctaag
1021 aagccaggta tcgcacttca gcagacagtg tgctgacact tggtcttctc ctgaaattcc
1081 caaattcact gaatggtacc atgccgatct ctgagaagtt atgttgcacc actgtgaagg
1141 tctagatgca agcttggctc cctcagaaag gcgcttccct tttgcatggc tgaggatcct
1201 tgaaggaacc tggtcagtct ccggttcagc ttccgacacc agagtggaac ccagtaagca
1261 ccatcaggaa tgaatttcac tacaagtgtg gataactctg attttcaaag gagtagttac
1321 ttgcaaatta catccttgct gaattcagga ggtatgaaac cctattttac catgttagaa
1381 aacagcccag gattttctca ttgctctgcc atcatatatg tctatgactt gagcccttat
//