LOCUS AK303627 3312 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58736 complete cds, highly similar to
Non-receptor tyrosine-protein kinase TYK2 (EC 2.7.10.2).
ACCESSION AK303627
VERSION AK303627.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3312)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3312
/clone="THYMU3043708"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498251"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 208..3012
/codon_start=1
/note="highly similar to Non-receptor tyrosine-protein
kinase TYK2 (EC 2.7.10.2)"
/protein_id="BAG64635.1"
/transl_table=1
/translation="MVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSG
VAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKK
AKAHKAVSQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAA
LSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLY
LIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVREL
GAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQK
EITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLD
PSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRER
GHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPG
VGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRS
PSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADV
LTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD
CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVTEYVPLGSLRDYLPRH
SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG
HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL
ELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIP
ILKTVHEKYQGQAPSVFSVC"
BASE COUNT 648 a 1042 c 1027 g 595 t
ORIGIN
1 ggcaatggga ggaggcgtct cggcggggga caagcagtag ctacccgcgg gagcggggag
61 gggtccgggt tcgagcttgt gttcccccgg aagggtgagt ccttccgccg gcatatccgg
121 cagcacagcg ccctgacccg gctgcgcctt cggaacgtct tccgcaggtt cctgcgggac
181 ttccagccgg gccgactctc ccagcagatg gtcatggtca aatacctagc cacactcgag
241 cggctggcac cccgcttcgg cacagagcgt gtgcccgtgt gccacctgag gctgctggcc
301 caggccgagg gggagccctg ctacatccgg gacagtgggg tggcccctac agaccctggc
361 cctgagtctg ctgctgggcc cccaacccac gaggtgctgg tgacaggcac tggtggcatc
421 cagtggtggc cagtagagga ggaggtgaac aaggaggagg gttctagtgg cagcagtggc
481 aggaaccccc aagccagcct gtttgggaag aaggccaagg ctcacaaggc agtcagccag
541 ccggcagaca ggccgcggga gccactgtgg gcctacttct gtgacttccg ggacatcacc
601 cacgtggtgc tgaaagagca ctgtgtcagc atccaccggc aggacaacaa gtgcctggag
661 ctgagcttgc cttcccgggc tgcggcgctg tccttcgtgt cgctggtgga cggctatttc
721 cgcctgacgg ccgactccag ccactacctg tgccacgagg tggctccccc acggctggtg
781 atgagcatcc gggatgggat ccacggaccc ctgctggagc catttgtgca ggccaagctg
841 cggcccgagg acggcctgta cctcattcac tggagcacca gccaccccta ccgcctgatc
901 ctcacagtgg cccagcgtag ccaggcacca gacggcatgc agagcttgcg gctccgaaag
961 ttccccattg agcagcagga cggggccttc gtgctggagg gctggggccg gtccttcccc
1021 agcgttcggg aacttggggc tgccttgcag ggctgcttgc tgagggccgg ggatgactgc
1081 ttctctctgc gtcgctgttg cctgccccaa ccaggagaaa cctccaatct catcatcatg
1141 cggggggctc gggccagccc caggacactc aacctcagcc agctcagctt ccaccgggtt
1201 gaccagaagg agatcaccca gctgtcccac ttgggccagg gcacaaggac caacgtgtat
1261 gagggccgcc tgcgagtgga gggcagcggg gaccctgagg agggcaagat ggatgacgag
1321 gaccccctcg tgcctggcag ggaccgtggg caggagctac gagtggtgct caaagtgctg
1381 gaccctagtc accatgacat cgccctggcc ttctacgaga cagccagcct catgagccag
1441 gtctcccaca cgcacctggc cttcgtgcat ggcgtctgtg tgcgcggccc tgaaaatatc
1501 atggtgacag agtacgtgga gcacggaccc ctggatgtgt ggctgcggag ggagcggggc
1561 catgtgccca tggcttggaa gatggtggtg gcccagcagc tggccagcgc cctcagctac
1621 ctggagaaca agaacctggt tcatggtaat gtgtgtggcc ggaacatcct gctggcccgg
1681 ctggggttgg cagagggcac cagccccttc atcaagctga gtgatcctgg cgtgggcctg
1741 ggcgccctct ccagggagga gcgggtggag aggatcccct ggctggcccc cgaatgccta
1801 ccaggtgggg ccaacagcct aagcaccgcc atggacaagt gggggtttgg cgccaccctc
1861 ctggagatct gctttgacgg agaggcccct ctgcagagcc gcagtccctc cgagaaggag
1921 catttctacc agaggcagca ccggctgccc gagccctcct gcccacagct ggccacactc
1981 accagccagt gtctgaccta tgagccaacc cagaggccat cattccgcac catcctgcgt
2041 gacctcaccc ggctgcagcc ccacaatctt gctgacgtct tgactgtgaa cccggactca
2101 ccggcgtcgg accctacggt tttccacaag cgctatttga aaaagatccg agatctgggc
2161 gagggtcact tcggcaaggt cagcttgtac tgctacgatc cgaccaacga cggcactggc
2221 gagatggtgg cggtgaaagc cctcaaggca gactgcggcc cccagcaccg ctcgggctgg
2281 aagcaggaga ttgacattct gcgcacgctc taccacgagc acatcatcaa gtacaagggc
2341 tgctgcgagg accaaggcga gaagtcgctg cagctggtca cggagtacgt gcccctgggc
2401 agcctccgag actacctgcc ccggcacagc atcgggctgg cccagctgct gctcttcgcc
2461 cagcagatct gcgagggcat ggcctatctg cacgcgcagc actacatcca ccgagaccta
2521 gccgcgcgca acgtgctgct ggacaacgac aggctggtca agatcgggga ctttggccta
2581 gccaaggccg tgcccgaagg ccacgagtac taccgcgtgc gcgaggatgg ggacagcccc
2641 gtgttctggt atgccccaga gtgcctgaag gagtataagt tctactatgc gtcagatgtc
2701 tggtccttcg gggtgaccct gtatgagctg ctgacgcact gtgactccag ccagagcccc
2761 cccacgaaat tccttgagct cataggcatt gctcagggtc agatgacagt tctgagactc
2821 actgagttgc tggaacgagg ggagaggctg ccacggcccg acaaatgtcc ctgtgaggtc
2881 tatcatctca tgaagaactg ctgggagaca gaggcgtcct ttcgcccaac cttcgagaac
2941 ctcataccca ttctgaagac agtccatgag aagtaccaag gccaggcccc ttcagtgttc
3001 agcgtgtgct gaggcacaat ggcagccctg cctgggagga ctggaccagg cagtggctgc
3061 agagggagcc tcctgctccc tgctccagga tgaaaccaag agggggatgt cagcctcacc
3121 cacaccgtgt gccttactcc tgtctagaga ccccacctct gtgaacttat ttttctttct
3181 tggccgtgag cctaaccatg atcttgaggg acccaacatt tgtaggggca ctaatccagc
3241 ccttaaatcc cccagcttcc aaacttgagg cccaccatct ccaccatctg gtaataaact
3301 catgttttct ct
//