LOCUS AK303618 1211 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60032 complete cds, highly similar to
Probable ATP-dependent RNA helicase DDX11 (EC 3.6.1.-).
ACCESSION AK303618
VERSION AK303618.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1211)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1211
/clone="THYMU3042434"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498242"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 101..967
/codon_start=1
/note="highly similar to Probable ATP-dependent RNA
helicase DDX11 (EC 3.6.1.-)"
/protein_id="BAG64627.1"
/transl_table=1
/translation="MAELYRVLEAGKIGIFESPTGTGKSLSLICGALSWLRDFEQKKR
EEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQKKEERDLVN
RLKVEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEETENLLRLSREMLETGPEAER
LEQLESGEEELVLAEYESDEEKKVASGVDEDEDDLEEEHITKIYHCSRTHSQLAQFVH
EVKKSPFGKDVRLVSLGSRQNLCVNEDVRSLGSVQLINDRCVDMQRSRHVAVLSVFSL
CACATLREEERS"
BASE COUNT 292 a 297 c 397 g 225 t
ORIGIN
1 acagagggga cccgccagtt tcaaattcag tggcgtttgc cctgattccc ggggcctggc
61 tttcagcgta gcaattctgc cggcgaagaa ggaagacttc atggcagagc tgtaccgggt
121 tttggaggct ggcaagattg ggatatttga gagtccaact ggcactggga agtccttaag
181 tcttatttgt ggggccctct cctggctccg tgactttgaa cagaagaagc gtgaagaaga
241 ggcacgactc cttgaaactg gaactggccc cttacatgat gagaaagatg aatccctgtg
301 tctgtcttcc tcctgcgaag gggctgcagg caccccgagg cctgctggag aaccggcctg
361 ggttactcag tttgtgcaga agaaagaaga gagggacctg gtgaaccgac tgaaggtgga
421 gcaggccagg aggaagcagc gagaagaacg cctgcagcag ctgcagcaca gggtgcagct
481 caagtatgca gccaagcgcc tgaggcagga agaagaagaa acagagaatc tcctccgcct
541 cagcagggag atgctagaga caggcccgga ggccgagcgg ctggagcagc tggagtctgg
601 ggaggaggag ctggtcctcg ccgaatacga gagtgatgag gagaaaaagg tggcgagcgg
661 agtggatgag gatgaggatg acctggagga agaacacata actaagattt atcactgtag
721 tcggacacac tcccagctgg cccagtttgt gcatgaggtg aagaagagcc cctttggcaa
781 ggatgttcgg ctggtctccc tcggctcccg gcagaacctt tgtgtaaatg aagacgtgag
841 aagcctaggt tctgtgcagc ttatcaacga ccgctgcgtg gacatgcaga gaagcaggca
901 cgttgctgtc ctctctgttt tctctctttg tgcctgtgcc accctcagag aagaagaaag
961 gagctgagga ggagaagcca aagaggagga ggcaggagaa gcaggcagcc tgccccttct
1021 acaaccacga gcagatgggc cttctccggg atgaggccct ggcagaggtg aaggacatgg
1081 agcagctgct ggcccttggg aaggaggccc gggcctgtcc ctattacagg agccgccttg
1141 ccatccctgc agcccagctg gtggtgctgc cctatcagat gctgctgcat gcgaccactc
1201 ggcaggccgc a
//