LOCUS AK303617 2632 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51177 complete cds, highly similar to Histone
deacetylase 4.
ACCESSION AK303617
VERSION AK303617.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2632)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2632
/clone="THYMU3042377"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498241"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 325..2265
/codon_start=1
/note="highly similar to Histone deacetylase 4"
/protein_id="BAH13999.1"
/transl_table=1
/translation="MLAMKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKG
KESAVASTEVKMKLQEFVLNKKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQS
GVSTSYNHPVLGMYDAKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVV
TALKKRPLDVTDSACSSAPGSGPSSPNNSSGSVSAENGIAPAVPSIPAETSLAHRLVA
REGSAAPLPLYTSPSLPNITLGLPATGPSAGTAGQQDAERLTLPALQQRLSLFPGTHL
TPYLSTSPLERDGGAAHSPLLQHMVLLEQPPAQAPLVTGLGALPLHAQSLVGADRVSP
SIHKLRQHRPLGRTQSAPLPQNAQALQHLVIQQQHQQFLEKHKQQFQQQQLQMNKIIP
KPSEPARQPESHPEETEEELREHQALLDEPYLDRLSGQKEAHAQAGVQVKQEPIESDE
EEAEPPREVEPGQRQPSEQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSFGGHR
PLSRAQSSPASATFPVSVQEPPTKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQ
SIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGS
LASVFVRLPCGGVGVSVPLMCK"
BASE COUNT 581 a 827 c 765 g 459 t
ORIGIN
1 aaaagtcctg tttttcgaag cctgaatttg gtattccagt gacgcacctg ccctccagaa
61 gccaactgag ggttcccatg gagaataagt acctattcac gatgctagga tgtggggcag
121 gagtgaagaa gagtgaaatg gccatcttcc cttgtggttc cagcattttc cgagcatgcc
181 gagggcagag ggtccctgtg tcttctttga agatcaagaa acaggcctga cgtctcagct
241 tgtgctatga acagggagtg ttgaaatcct gtttgtcctg atggctttca ctttgcaggc
301 tttgctctac agcaacaaca ggagatgctg gccatgaagc accagcagga gctgctggaa
361 caccagcgga agctggagag gcaccgccag gagcaggagc tggagaagca gcaccgggag
421 cagaagctgc agcagctcaa gaacaaggag aagggcaaag agagtgccgt ggccagcaca
481 gaagtgaaga tgaagttaca agaatttgtc ctcaataaaa agaaggcgct ggcccaccgg
541 aatctgaacc actgcatttc cagcgaccct cgctactggt acgggaaaac gcagcacagt
601 tcccttgacc agagttctcc accccagagc ggagtgtcga cctcctataa ccacccggtc
661 ctgggaatgt acgacgccaa agatgacttc cctcttagga aaacagcttc tgaaccgaat
721 ctgaaattac ggtccaggct aaagcagaaa gtggccgaaa gacggagcag ccccctgtta
781 cgcaggaaag acgggccagt ggtcactgct ctaaaaaagc gtccgttgga tgtcacagac
841 tccgcgtgca gcagcgcccc aggctccgga cccagctcac ccaacaacag ctccgggagc
901 gtcagcgcgg agaacggtat cgcgcccgcc gtccccagca tcccggcgga gacgagtttg
961 gcgcacagac ttgtggcacg agaaggctcg gccgctccac ttcccctcta cacatcgcca
1021 tccttgccca acatcacgct gggcctgcct gccaccggcc cctctgcggg cacggcgggc
1081 cagcaggacg ccgagagact cacccttccc gccctccagc agaggctctc ccttttcccc
1141 ggcacccacc tcactcccta cctgagcacc tcgcccttgg agcgggacgg aggggcagcg
1201 cacagccctc ttctgcagca catggtctta ctggagcagc cgccggcaca agcacccctc
1261 gtcacaggcc tgggagcact gcccctccac gcacagtcct tggttggtgc agaccgggtg
1321 tccccctcca tccacaagct gcggcagcac cgcccactgg ggcggaccca gtcggccccg
1381 ctgccccaga acgcccaggc tctgcagcac ctggtcatcc agcagcagca tcagcagttt
1441 ctggagaaac acaagcagca gttccagcag cagcaactgc agatgaacaa gatcatcccc
1501 aagccaagcg agccagcccg gcagccggag agccacccgg aggagacgga ggaggagctc
1561 cgtgagcacc aggctctgct ggacgagccc tacctggacc ggctgtcggg gcagaaggag
1621 gcgcacgcac aggccggcgt gcaggtgaag caggagccca ttgagagcga tgaggaagag
1681 gcagagcccc cacgggaggt ggagccgggc cagcgccagc ccagtgagca ggagctgctc
1741 ttcagacagc aagccctcct gctggagcag cagcggatcc accagctgag gaactaccag
1801 gcgtccatgg aggccgccgg catccccgtg tccttcggcg gccacaggcc tctgtcccgg
1861 gcgcagtcct cacccgcgtc tgccaccttc cccgtgtctg tgcaggagcc ccccaccaag
1921 ccgaggttca cgacaggcct cgtgtatgac acgctgatgc tgaagcacca gtgcacctgc
1981 gggagtagca gcagccaccc cgagcacgcc gggaggatcc agagcatctg gtcccgcctg
2041 caggagacgg gcctccgggg caaatgcgag tgcatccgcg gacgcaaggc caccctggag
2101 gagctacaga cggtgcactc ggaagcccac accctcctgt atggcacgaa ccccctcaac
2161 cggcagaaac tggacagtaa gaaacttcta ggctcgctcg cctccgtgtt cgtccggctc
2221 ccttgcggtg gtgttggggt aagtgttcct ttaatgtgta aataatgtcc tgtttcttct
2281 cgagtcccag tggtcacaga aatcgcagcc ttgcttccct caaagtgaat aattgctgcc
2341 aggtgttttc catacgcagg ggctgcccat gtgcggcttc aaaggccgtg tgagccgaga
2401 gcgttttgat cgccgactcg ggcacctttc tctggggaag gttgtctggc gcaggtggct
2461 ggggctctgg ggtgcagtgg ctctcgcttt aagaaacagg atcctgtatg cagccagcat
2521 ctcatcccct tcgaagtctg cggcagtaat ctgctcacat caggccacga gtatggtgcg
2581 ggtaggatgc gtgcttctgt attctgtacc tagtttccac ccgaagctac ag
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