LOCUS AK303554 2522 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54397 complete cds, highly similar to
TATA-binding protein-associated factor 172 (EC 3.6.1.-).
ACCESSION AK303554
VERSION AK303554.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2522)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2522
/clone="THYMU3034711"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498178"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 292..2325
/codon_start=1
/note="highly similar to TATA-binding protein-associated
factor 172 (EC 3.6.1.-)"
/protein_id="BAG64578.1"
/transl_table=1
/translation="MEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRL
MPLEAGIPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQQDGV
NWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSLVV
CPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDI
DFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFD
FLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKE
DVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKA
TGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQL
LLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGS
IPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMD
RAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLD
LFTLDKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK"
BASE COUNT 775 a 482 c 539 g 726 t
ORIGIN
1 ctttatatgt gccttcaata ccccagtact gcagtgaggc acatggctgc tcgttgtgta
61 ggtgtcatga gcaaaatagc taccatggaa acaatgaata tttttttgga gaaggttctt
121 ccgtggctgg gagcaattga tgacagtgtc aaacaagagg gtgcaattga agcacttgcc
181 tatatttcac agagctcaaa agatggatga agatcaaatc agtagaaact ctggttcaaa
241 aatactgaag attacaggag aactgcgctt actaggctca cttcaggtgt aatggaacaa
301 ctagatgttg gtattgttcc atatattgtc cttttagttg ttcctgtatt aggaagaatg
361 agtgatcaga cagacagtgt gagattcatg gccacgcagt gctttgcaac gctaattaga
421 ctcatgccac ttgaggcagg cattccagac cctccaaaca tgtcagcaga attaatccaa
481 ttgaaagcca aggagcgaca ctttttggag caattgttag atgggaaaaa attggaaaat
541 tataaaattc cagtaccaat caatgctgaa ctcagaaaat atcagcagga tggtgtgaac
601 tggttagcat ttcttaataa gtataaactt catggaattc tgtgtgatga catgggttta
661 ggaaaaactt tacagtccat ctgcattcta gcaggagatc attgtcatag ggcccaggaa
721 tatgcaagat caaaattagc agaatgtatg ccacttcctt ccttagtggt ttgtccgcca
781 acattaacag gccattgggt ggatgaagta ggtaaatttt gctctagaga atatctcaac
841 ccgttgcatt acactggacc tcccactgaa agaataaggt tacagcacca agtaaaaagg
901 cacaatctaa tagtggcttc atatgatgtt gtgaggaatg acatagattt ctttagaaat
961 attaaattta actactgcat tcttgatgaa ggccatgtca tcaaaaatgg aaaaacaaag
1021 ttgtcaaaag cagtaaaaca actgactgct aattatagga ttattctttc tggaacacca
1081 atccagaaca acgttttgga gctgtggtca ttatttgatt tcctcatgcc aggatttttg
1141 ggtactgaac gccagtttgc tgctcgatat ggtaaaccta tattagcaag tagggatgct
1201 cgaagctcca gtcgagagca agaagcaggt gttcttgcta tggatgcgct gcaccgccaa
1261 gtactaccgt ttcttttgag aagaatgaaa gaagatgttt tgcaggatct tccacctaaa
1321 attattcaag actattattg tactcttagt cctctccagg ttcagctcta tgaagatttt
1381 gctaagtctc gtgccaagtg tgatgttgat gaaacagttt cttcagctac actttctgaa
1441 gaaactgaaa aaccaaagct taaagctaca ggccacgtat tccaggcatt acagtactta
1501 cgtaaactgt gcaaccatcc agcattagtc ttaacacctc aacatccaga attcaagacc
1561 actgccgaaa aactggcagt tcagaattct tctctacatg atattcaaca tgcccctaag
1621 ctctcagctt tgaaacaatt gctgttggac tgcggtttgg gaaatggcag cacttccgag
1681 agtggcacag agtctgttgt ggcccagcac aggatactga tattctgtca gctgaaaagc
1741 atgcttgata tagtagagca tgatctcctc aaacctcact tgccctctgt cacttatttg
1801 agattagatg gcagcatacc tcctggtcag aggcattcca ttgtttcccg gtttaataat
1861 gatccatcta tagacgttct gttacttacc actcacgttg gtggcctggg acttaatttg
1921 acaggcgctg acacagtagt atttgtggag catgactgga atcctatgcg agatctacaa
1981 gccatggacc gggcccatcg cattgggcag aaacgtgtgg ttaacgtata ccgattgata
2041 accagaggaa cattggaaga aaaaataatg gggttgcaga aattcaagat gaacatagcg
2101 aatactgtta ttagccaaga gaattctagt ttgcagagca tggggactga tcagcttctt
2161 gatctgttta ctcttgataa ggatggcaaa gcagaaaaag ctgacacctc tacttctggg
2221 aaagcaagta tgaaatcaat tcttgaaaac ctgagtgatc tttgggatca agagcagtat
2281 gattcagagt acagcctgga aaattttatg cattctctca agtaactatc aaatattgta
2341 aatgcaattg ctgctagttc agttacattt ctgctgatat tcagcaaatt tctaagttta
2401 tggtgaactt ttaactcaat gtgtaaatag atctggagaa tattcagcat aatgctggct
2461 cttgtttcac tgggggaaac aagttattct caaatatttg cactgtatta aatttaaatg
2521 tt
//