LOCUS AK303539 3037 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61519 complete cds, highly similar to
Leukocyte common antigen precursor (EC 3.1.3.48).
ACCESSION AK303539
VERSION AK303539.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3037)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3037
/clone="THYMU3032716"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498163"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 87..2930
/codon_start=1
/note="highly similar to Leukocyte common antigen
precursor (EC 3.1.3.48)"
/protein_id="BAG64565.1"
/transl_table=1
/translation="MTMYLWLKLLAFGFAFLDTEVFVTGQSPTPSPTGLTTAKMPSVP
LSSDPLPTHTTAFSPASTFERENDFSETTTSLSPDNTSTQVSPDSLDNASAFNTTGVS
SVQTPHLPTHADSQTPSAGTDTQTFSGSAANAKLNPTPGSNAISDVPGERSTASTFPT
DPVSPLTTTLSLAHHSSAALPARTSNTTITANTSDAYLNASETTTLSPSGSAVISTTT
IATTPSKPTCDEKYANITVDYLYNKETKLFTAKLNVNENVECGNNTCTNNEVHNLTEC
KNASVSISHNSCTAPDKTLILDVPPGVEKFQLHDCTQVEKADTTICLKWKNIETFTCD
TQNITYRFQCGNMIFDNKEIKLENLEPEHEYKCDSEILYNNHKFTNASKIIKTDFGSP
GEPQIIFCRSEAAHQGVITWNPPQRSFHNFTLCYIKETEKDCLNLDKNLIKYDLQNLK
PYTKYVLSLHAYIIAKVQRNGSAAMCHFTTKSAPPSQVWNMTVSMTSDNSMHVKCRPP
RDRNGPHERYHLEVEAGNTLVRNESHKNCDFRVKDLQYSTDYTFKAYFHNGDYPGEPF
ILHHSTSYNSKALIAFLAFLIIVTSIALLVVLYKIYDLHKKRSCNLDEQQELVERDDE
KQLMNVEPIHADILLETYKRKIADEGRLFLAEFQSIPRVFSKFPIKEARKPFNQNKNR
YVDILPYDYNRVELSEINGDAGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRMI
WEQKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRAYGYVVKLRRQRCLMVQVEAQYIL
IHQALVEYNQFGETEVNLSELHPYLHNMKKRDPPSEPSPLEAEFQRLPSYRSWRTQHI
GNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINA
SFIMSYWKPEVMIAAHCGALQCWCWAHRNLYRN"
BASE COUNT 992 a 648 c 611 g 786 t
ORIGIN
1 agaggaggaa attgttcctc gtctgataag acaacagtgg agaaaggacg catgctgttt
61 cttagggaca cggctgactt ccagatatga ccatgtattt gtggcttaaa ctcttggcat
121 ttggctttgc ctttctggac acagaagtat ttgtgacagg gcaaagccca acaccttccc
181 ccactggatt gactacagca aagatgccca gtgttccact ttcaagtgac cccttaccta
241 ctcacaccac tgcattctca cccgcaagca cctttgaaag agaaaatgac ttctcagaga
301 ccacaacttc tcttagtcca gacaatactt ccacccaagt atccccggac tctttggata
361 atgctagtgc ttttaatacc acaggtgttt catcagtaca gacgcctcac cttcccacgc
421 acgcagactc gcagacgccc tctgctggaa ctgacacgca gacattcagc ggctccgccg
481 ccaatgcaaa actcaaccct accccaggca gcaatgctat ctcagatgtc ccaggagaga
541 ggagtacagc cagcaccttt cctacagacc cagtttcccc attgacaacc accctcagcc
601 ttgcacacca cagctctgct gccttacctg cacgcacctc caacaccacc atcacagcga
661 acacctcaga tgcctacctt aatgcctctg aaacaaccac tctgagccct tctggaagcg
721 ctgtcatttc aaccacaaca atagctacta ctccatctaa gccaacatgt gatgaaaaat
781 atgcaaacat cactgtggat tacttatata acaaggaaac taaattattt acagcaaagc
841 taaatgttaa tgagaatgtg gaatgtggaa acaatacttg cacaaacaat gaggtgcata
901 accttacaga atgtaaaaat gcgtctgttt ccatatctca taattcatgt actgctcctg
961 ataagacatt aatattagat gtgccaccag gggttgaaaa gtttcagtta catgattgta
1021 cacaagttga aaaagcagat actactattt gtttaaaatg gaaaaatatt gaaaccttta
1081 cttgtgatac acagaatatt acctacagat ttcagtgtgg taatatgata tttgataata
1141 aagaaattaa attagaaaac cttgaacccg aacatgagta taagtgtgac tcagaaatac
1201 tctataataa ccacaagttt actaacgcaa gtaaaattat taaaacagat tttgggagtc
1261 caggagagcc tcagattatt ttttgtagaa gtgaagctgc acatcaagga gtaattacct
1321 ggaatccccc tcaaagatca tttcataatt ttaccctctg ttatataaaa gagacagaaa
1381 aagattgcct caatctggat aaaaacctga tcaaatatga tttgcaaaat ttaaaacctt
1441 atacgaaata tgttttatca ttacatgcct acatcattgc aaaagtgcaa cgtaatggaa
1501 gtgctgcaat gtgtcatttc acaactaaaa gtgctcctcc aagccaggtc tggaacatga
1561 ctgtctccat gacatcagat aatagtatgc atgtcaagtg taggcctccc agggaccgta
1621 atggccccca tgaacgttac catttggaag ttgaagctgg aaatactctg gttagaaatg
1681 agtcgcataa gaattgcgat ttccgtgtaa aagatcttca atattcaaca gactacactt
1741 ttaaggccta ttttcacaat ggagactatc ctggagaacc ctttatttta catcattcaa
1801 catcttataa ttctaaggca ctgatagcat ttctggcatt tctgattatt gtgacatcaa
1861 tagccctgct tgttgttctc tacaaaatct atgatctaca taagaaaaga tcctgcaatt
1921 tagatgaaca gcaggagctt gttgaaaggg atgatgaaaa acaactgatg aatgtggagc
1981 caatccatgc agatattttg ttggaaactt ataagaggaa gattgctgat gaaggaagac
2041 tttttctggc tgaatttcag agcatcccgc gggtgttcag caagtttcct ataaaggaag
2101 ctcgaaagcc ctttaaccag aataaaaacc gttatgttga cattcttcct tatgattata
2161 accgtgttga actctctgag ataaacggag atgcagggtc aaactacata aatgccagct
2221 atattgatgg tttcaaagaa cccaggaaat acattgctgc acaaggtccc agggatgaaa
2281 ctgttgatga tttctggagg atgatttggg aacagaaagc cacagttatt gtcatggtca
2341 ctcgatgtga agaaggaaac aggaacaagt gtgcagaata ctggccgtca atggaagagg
2401 gcactcgggc ttatggttat gttgtcaagc taaggcgaca gagatgcctg atggttcaag
2461 tagaggccca gtacatcttg atccatcagg ctttggtgga atacaatcag tttggagaaa
2521 cagaagtgaa tttgtctgaa ttacatccat atctacataa catgaagaaa agggatccac
2581 ccagtgagcc gtctccacta gaggctgaat tccagagact tccttcatat aggagctgga
2641 ggacacagca cattggaaat caagaagaaa ataaaagtaa aaacaggaat tctaatgtca
2701 tcccatatga ctataacaga gtgccactta aacatgagct ggaaatgagt aaagagagtg
2761 agcatgattc agatgaatcc tctgatgatg acagtgattc agaggaacca agcaaataca
2821 tcaatgcatc ttttataatg agctactgga aacctgaagt gatgattgct gcccattgtg
2881 gtgcactgca gtgctggtgt tgggcgcaca ggaacctata tcggaattga tgccatgcta
2941 gaaggcctgg aagccgagaa caaagaaaag tcaaagttat tgttatgctg acagaactga
3001 aacatggaga ccaggaaatc tgtgctcagt actgggg
//