LOCUS       AK303519                2724 bp    mRNA    linear   HUM 24-JUL-2008
DEFINITION  Homo sapiens cDNA FLJ54527 complete cds, highly similar to Homo
            sapiens sphingomyelin phosphodiesterase 4, neutral membrane,
            transcript variant 1, mRNA.
ACCESSION   AK303519
VERSION     AK303519.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..2724
                     /clone="THYMU3030683"
                     /clone_lib="THYMU3"
                     /db_xref="H-InvDB:HIT000498143"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /organism="Homo sapiens"
                     /tissue_type="thymus"
     CDS             257..2431
                     /codon_start=1
                     /note="highly similar to Homo sapiens sphingomyelin
                     phosphodiesterase 4, neutral membrane, transcript variant
                     1, mRNA"
                     /protein_id="BAG64547.1"
                     /transl_table=1
                     /translation="MAGRKHFWQPRWCPRWLEPPLLTGARESCGVQHRDGISRPWGPV
                     KASIQECILPDSPLYHNKVQFTPTGGLGLNLALNPFEYYIFFFALSLITQKPLPVSLH
                     VRTSDCAYFILVDRYLSWFLPTEGSVPPPLSSSPGGTSPSPPPRTPAIPFASYGLHHT
                     SLLKRHISHQTSVNADPASHEIWRSETLLQVFVEMWLHHYSLEMYQKMQSPHAKESFT
                     PTEEHVLVVRLLLKHLHAFANSLKPEQASPSAHSHATSPLEEFKRAAVPRFVQQKLYL
                     FLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPDKQAPGSDSQPRCVSEKWAPFVQEN
                     LLMYTKLFVGFLNRALRTDLVSPKHALMVFRVAKVFAQPNLAEMIQKGEQLFLEPELV
                     IPHRQHRLFTAPTFTGSFLSPWPPAVTDASFKVKSHVYSLEGQDCKYTPMFGPEARTL
                     VLRLAQLITQAKHTAKSISDQCAESPAGHSFLSWLGFSSMDTNGSYTANDLDEMGQDS
                     VRKTDEYLEKALEYLRQIFRLSEAQLRQFTLALGTTQDENGKKQLPDCIVGEDGLILT
                     PLGRYQIINGLRRFEIEYQGDPELQPIRSYEIASLVRTLFRLSSAINHRFAGQMAALC
                     SRDDFLGSFCRYHLTEPGLASRHLLSPVGRRQVAGHTRGPGLSLRFLGSYRTLVSLLL
                     AFFVASLFCVGPLPCTLLLTLGYVLYASAMTLLTERGKLHQP"
BASE COUNT          541 a          889 c          734 g          560 t
ORIGIN      
        1 ttttcggcgc cgtggcggaa tggcggcttc catctctgag gcgagcgacg ctatggatcc
       61 cacagtggtt tgctaagaag gccattttca actctccact ggaggctgct atggcgttcc
      121 ctcacctgca gcagcccagc tttctactgg ctagcctgaa agctgactct ataaataagc
      181 cctttgcaca gcagtgccaa gacttggtta aagtcattga ggactttcca gcaaaggagc
      241 tgcacaccat cttcccatgg ctggtagaaa gcatttttgg cagcctagat ggtgtcctcg
      301 ttggctggaa cctccgctgc ttacaggggc gcgtgaatcc tgtggagtac agcatcgtga
      361 tggaatttct cgaccctggg gtcctgtgaa ggcgtccatc caggagtgca tcctccctga
      421 cagtcctctg taccacaaca aggtccagtt cacccctact gggggccttg gtctgaactt
      481 ggccctgaat ccgttcgagt attacatatt cttctttgcc ttgagcctca tcactcagaa
      541 accacttcct gtgtccctcc acgtccgtac ttcagactgt gcctatttca tcctggtgga
      601 caggtacctg tcatggttcc tgcccaccga aggcagtgtg cccccaccac tctcctccag
      661 cccagggggg accagcccct caccacctcc caggacacca gccataccct ttgcttccta
      721 tggcctccac cacactagcc tcctaaagcg acacatctct catcagacat ctgtgaatgc
      781 agaccccgcc tcccacgaga tctggaggtc agaaactctg ctccaggttt ttgttgaaat
      841 gtggcttcat cactattcct tggagatgta tcaaaaaatg cagtcccctc atgccaagga
      901 gtcgttcacg cctactgagg agcatgtgtt ggtggtgcgc ctgctgctga agcacctgca
      961 cgcctttgcc aacagcctga agccagagca ggcctcaccc tccgcccact cccacgccac
     1021 cagccccctg gaggagttca aacgggctgc tgtcccgagg ttcgtccagc agaaactcta
     1081 cctcttcttg cagcattgct ttggccactg gcccctggac gcatcgttca gagctgtcct
     1141 ggagatgtgg ctgagctacc tgcagccgtg gcggtacgcg cctgacaagc aggctccggg
     1201 cagcgactcc cagccccggt gtgtgtcgga gaaatgggca ccctttgtcc aggagaacct
     1261 gctgatgtac accaagttgt ttgtgggctt tctgaaccgc gcgctccgca cagacctggt
     1321 cagccccaag cacgcgctca tggtgttccg agtggccaaa gtctttgccc agcccaacct
     1381 ggctgagatg attcagaaag gtgagcagct attcctggag ccagagctgg tcatccccca
     1441 ccgccagcac cgactcttca cggcccccac attcactggg agcttcctgt caccctggcc
     1501 accagcggtc actgatgcct ccttcaaggt gaagagccac gtctacagcc tggagggcca
     1561 ggactgcaag tacaccccga tgtttgggcc cgaggcccgc accctggtcc tgcgcctcgc
     1621 tcagctcatc acacaggcca aacacacagc caagtccatc tccgaccagt gtgcggagag
     1681 cccggctggc cactccttcc tctcatggct gggctttagc tccatggaca ccaatggctc
     1741 ctacacagcc aacgacctgg acgagatggg gcaagacagt gtccggaaga cagatgaata
     1801 cctggagaag gccctggagt acctgcgcca gatattccgg ctcagcgaag cgcagctcag
     1861 gcagttcaca ctcgccttgg gcaccaccca ggatgagaat ggaaaaaagc aactccccga
     1921 ctgcatcgtg ggtgaggacg gactcatcct tacgcccctg gggcggtacc agatcatcaa
     1981 tgggctgcga aggtttgaaa ttgagtacca gggggacccg gagctgcagc ccatccggag
     2041 ctatgagatc gccagcttgg tccgcacact ctttaggctg tcgtctgcca tcaaccacag
     2101 atttgcagga cagatggcgg ctctgtgttc ccgggatgac ttcctcggca gcttctgtcg
     2161 ctaccacctc acagaacctg ggctggccag caggcacctg ctgagccctg tggggcggag
     2221 gcaggtggcc ggccacaccc gcggccccgg gctcagcctg cgcttcctgg gcagttaccg
     2281 gacgctggtc tcgctgctgc tggccttctt cgtggcctct ctgttctgcg tcgggcccct
     2341 cccatgcacg ctgctgctca ccctgggcta tgtcctctac gcctctgcca tgacactgct
     2401 gaccgagcgg gggaagctgc accagccctg aaggtgtcag ctgccttcag agcaggctgg
     2461 agggatttgc cacacagccc cacccttggg ctgagaggac ctgggaagcc cctccaggag
     2521 ggaacacggt catcctcggg cttctggagc ggggttcctg cagccgcaga ggcatctgga
     2581 ggaaacgcaa ccaagaaagg aaggcaggtg ggccccagca aaggagtagc tgccagggct
     2641 caacagctac gctctgtgac agcgcagagc tcagcgccgg cctttccctc cctccgccaa
     2701 ggactcacgg ccaagccagc tctc
//