LOCUS AK303486 2490 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54220 complete cds, highly similar to Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3). ACCESSION AK303486 VERSION AK303486.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2490) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2490 /clone="THYMU3027067" /clone_lib="THYMU3" /db_xref="H-InvDB:HIT000498110" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thymus" CDS 152..2146 /codon_start=1 /note="highly similar to Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)" /protein_id="BAG64522.1" /transl_table=1 /translation="MQAHELFRYFRMPELVDFRQYVRTLPTNTLMGFGAFAALTTFWY ATRPKPLKPPCDLSMQSVEVAGSGGARRSALLDSDEPLVYFYDDVTTLYEGFQRGIQV SNNGPCLGSRKPDQPYEWLSYKQWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAE LSLVFVDKPEKAKLLLEGVENKLIPGLKIIVVMDAYGSELVERGQRCGVEVTSMKAME DLGRANRRKPKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATENTVNP CPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPR LLNRMFDRIFGQANTTLKRWLLDFASKRKEAELRSGIIRNNSLWDRLIFHKVQSSLGG RVRLMVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCLTMPGDWTAGHVGAPM PCNLIKLVDVEEMNYMAAEGEGEVCVKGPNVFQGYLKDPAKTAEALDKDGWLHTGDIG KWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAI VVPDVETLCSWAQKRGFEGSFEELCRNKDVKKAILEDMVRLGKDSGLKPFEQVKGITL HPELFSIDNGLLTPTMKAKKPELRNYFRSQIDDLYSTIKV" BASE COUNT 688 a 551 c 658 g 593 t ORIGIN 1 gcaaccagcg ggccgaggcg gcggcgccag cggcgcctta aatagcatcc agagccggcg 61 cagggcaggg agtgggctgc agtgacagcc ggcggcggag cggccggtcc acggaggaga 121 attcagctta gagaactatc aacacaggac aatgcaagcc catgagctgt tccggtattt 181 tcgaatgcca gagctggttg acttccgaca gtacgtgcgt actcttccga ccaacacgct 241 tatgggcttc ggagcttttg cagcactcac caccttctgg tacgccacga gacccaaacc 301 cctgaagccg ccatgcgacc tctccatgca gtcagtggaa gtggcgggta gtggtggtgc 361 acgaagatcc gcactacttg acagcgacga gcccttggtg tatttctatg atgatgtcac 421 aacattatac gaaggtttcc agaggggaat acaggtgtca aataatggcc cttgtttagg 481 ctctcggaaa ccagaccaac cctatgaatg gctttcatat aaacagtggg tgattattga 541 acaaggatgc tttgcttatt cgatggtgat cgttccactt tatgataccc ttggaaatga 601 agccatcacg tacatagtca acaaagctga actctctctg gtttttgttg acaagccaga 661 gaaggccaaa ctcttattag agggtgtaga aaataagtta ataccaggcc ttaaaatcat 721 agttgtcatg gatgcctacg gcagtgaact ggtggaacga ggccagaggt gtggggtgga 781 agtcaccagc atgaaggcga tggaggacct gggaagagcc aacagacgga agcccaagcc 841 tccagcacct gaagatcttg cagtaatttg tttcacaagt ggaactacag gcaaccccaa 901 aggagcaatg gtcactcacc gaaacatagt gagcgattgt tcagcttttg tgaaagcaac 961 agagaataca gtcaatcctt gcccagatga tactttgata tctttcttgc ctctcgccca 1021 tatgtttgag agagttgtag agtgtgtaat gctgtgtcat ggagctaaaa tcggattttt 1081 ccaaggagat atcaggctgc tcatggatga cctcaaggtg cttcaaccca ctgtcttccc 1141 cgtggttcca agactgctga accggatgtt tgaccgaatt ttcggacaag caaacaccac 1201 gctgaagcga tggctcttgg acttcgcctc caagaggaaa gaagcagagc ttcgcagcgg 1261 catcatcaga aacaacagcc tgtgggaccg gctgatcttc cacaaagtac agtcgagcct 1321 gggcggaaga gtccggctga tggtgacagg agccgccccg gtgtctgcca ctgtgctgac 1381 gttcctcaga gcagccctgg gctgtcagtt ttatgaagga tatggacaga cagagtgcac 1441 tgccgggtgc tgcctaacca tgcctggaga ctggaccgca ggccatgttg gggccccgat 1501 gccgtgcaat ttgataaaac ttgttgatgt ggaagaaatg aattacatgg ctgccgaggg 1561 cgagggcgag gtgtgtgtga aagggccaaa tgtatttcag ggctacttga aggacccagc 1621 gaaaacagca gaagctttgg acaaagacgg ctggttacac acaggggaca ttggaaaatg 1681 gttaccaaat ggcaccttga aaattatcga ccggaaaaag cacatattta agctggcaca 1741 aggagaatac atagcccctg aaaagattga aaatatctac atgcgaagtg agcctgttgc 1801 tcaggtgttt gtccacggag aaagcctgca ggcatttctc attgcaattg tggtaccaga 1861 tgttgagaca ttatgttcct gggcccaaaa gagaggattt gaagggtcgt ttgaggaact 1921 gtgcagaaat aaggatgtca aaaaagctat cctcgaagat atggtgagac ttgggaagga 1981 ttctggtctg aaaccatttg aacaggtcaa aggcatcaca ttgcaccctg aattattttc 2041 tatcgacaat ggccttctga ctccaacaat gaaggcgaaa aagccagagc tgcggaacta 2101 tttcaggtcg cagatagatg acctctattc cactatcaag gtttagtgtg aagaagaaag 2161 ctcagaggaa atggcacagt tccacaatct cttctcctgc tgatggcctt catgttgtta 2221 attttgaata cagcaagtgt agggaaggaa gcgttcgtgt ttgacttgtc cattcggggt 2281 tcttctcata ggaatgctag aggaaacaga acactgcctt acagtcacct catgttgcag 2341 accatgttta tggtaataca cactttccaa aatgagcctt aaaaattgta aaggggatac 2401 tataaatgtg ctaagttatt tgagacttcc tcagtttaaa aagtgggttt taaatcttct 2461 gtctccctgt ttttctaatc aaggggttag //