LOCUS AK303431 3844 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ58216 complete cds, highly similar to Zinc finger protein 539. ACCESSION AK303431 VERSION AK303431.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3844) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3844 /clone="THYMU3021022" /clone_lib="THYMU3" /db_xref="H-InvDB:HIT000498055" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thymus" CDS 250..1974 /codon_start=1 /note="highly similar to Zinc finger protein 539" /protein_id="BAG64481.1" /transl_table=1 /translation="MCPHFAQDLWPEQGMEDSFQKAILRRYGKYGHENLQLRKGCKSV DEYKVNKEGYNGLNQCFTTAQSKVFQCDKYLKVFYKFLNSNRPKIRHTEKKSFKCKKR VKLFCMLSHKTQHKSIYHREKSYKCKECGKTFNWSSTLTNHRKIYTEEKPYKCEEYNK SPKQLSTLTTHEIIHAGEKLYKCEECGEAFNRSSNLTTHKIIHTGEKPYKCEECGKAF IWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKAFSQ SSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGFNRSS NLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIWSSTL TRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAFNWSSTLTK HKIIHTEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNRSSTFTKHK VIHTGVKPYKCEECGKAFFWSSTLTKHKRIHTGEQPYKSEKFGKAFNRSSHLTTDKIT HWREILQV" BASE COUNT 1404 a 631 c 650 g 1159 t ORIGIN 1 cggaccagag cttggaatcc gtctctgctc ttctgcattt tccacctcgg gagcccctgg 61 ggactctgtg acggcctctg ttgccctgtg atctgcaggt ccggagagac gcacagctaa 121 gatgtcagga catcctggaa gctgggaaag ggtcttgcca tctctaagct ggacctggtg 181 acctttttgg agggaaagag cgagccctgg actgtgaaga gtgaggagac catagctgca 241 cagccaggta tgtgtcctca ttttgctcaa gacctttggc cagagcaggg catggaagat 301 tcttttcaaa aagcaatact gagaagatat ggaaaatatg gacatgagaa tttacagtta 361 agaaaaggct gtaaaagtgt ggatgagtat aaggtgaaca aagaaggtta taatggactt 421 aaccagtgtt tcacaactgc ccagagcaaa gtatttcaat gtgataaata tttgaaagtc 481 ttctataaat ttttaaattc aaacagacct aagataagac atactgaaaa gaaatctttc 541 aaatgtaaaa aacgtgtcaa attattttgc atgctttcac ataaaaccca acacaaaagc 601 atttatcata gagagaagtc ctacaaatgt aaagaatgtg gaaaaacctt taattggtcc 661 tcaaccctta ctaatcatag gaaaatttat actgaagaga aaccttacaa atgtgaagaa 721 tataacaaat ctcctaagca actctcaacc cttactacac atgaaataat tcatgctgga 781 gagaaactct acaaatgtga agaatgtggt gaagctttta atcgatcctc aaatcttact 841 acacataaga taattcatac tggagagaaa ccttacaagt gtgaagaatg tggcaaagca 901 tttatctggt cctcaaccct tactgagcat aagaaaattc atactagaaa gaaaccctac 961 aagtgtgaag aatgtggcaa agcatttata tggtcctcaa cactaactag acataagagg 1021 atgcacactg gagagaaacc ctacaaatgt gaagaatgtg gcaaagcttt tagccagtcc 1081 tcaaccctta ctacacataa gataattcat actggagaga aacgctacaa atgcttagaa 1141 tgtggcaaag cttttaagca actctcaact cttactacac ataaaataat tcatgttgga 1201 gagaaactct acaaatgtga agaatgcggc aaaggtttta atcgatcttc aaatcttact 1261 acacataaga taattcatac tggagagaaa ccttacaagt gtgaagaatg tggcaaagca 1321 tttatctggt cctcaaccct tactaaacat aagagaattc atactagaga gaaaccctac 1381 aaatgtgaag aatgtggcaa ggcatttata tggtcctcaa ccctaactag acataagagg 1441 atgcacactg gagagaaacc ctacaaatgt gaagaatgtg gcaaatcttt tagccaatcc 1501 tcaaccctta ctacacataa gataattcat actggagaga aaccctacaa atgtgaagaa 1561 tgtggcaaag cctttaactg gtcctcaact cttactaaac ataagataat tcatactgaa 1621 gagaaaccct acaaatgtga aaaatgtggc aaagccttta agcagtcttc aatccttact 1681 aaccataaga gaattcatac tggagagaaa ccctataaat gtgaagaatg tggcaaatct 1741 tttaaccggt cttcaacttt tactaaacat aaggtaattc atactggagt aaaaccctac 1801 aaatgtgaag aatgtggcaa agcatttttc tggtcctcaa ccctaactaa acataagaga 1861 attcatactg gagagcaacc ctacaaatcg gaaaaatttg gcaaagcctt taatcggtcc 1921 tcgcacctca ccacagataa gataactcat tggagagaaa tcttacaagt atgaataatg 1981 tgccaaagcc taagaaaacc ctcaattctt aatagatata agattattcc tactggagag 2041 aaactacaaa cctgagagag gcgctaatgc ttttgacagt acctaaaact ttaaagaaaa 2101 tcattctgct gaaaaatcct agaaatgtga agaatgtgaa aaagccttta aatgattgtc 2161 acacttgatt gtaggtaaga taattcatac tggagaaaac taccagtgtg aacaacgtgg 2221 ccaagcttcg acaatgctca caccctattg cacaggaaag catttatact tgagaagaaa 2281 tgtacaaata ttggcaaagt aaaaaatcca ttaacacctg ctcacatctt actcaaaatt 2341 gtagagttca tagtaaataa aagcattaaa attctaatta ctctcagaag atctgtcaga 2401 aagtatgtct ttaaagtata gaagagcatt tattttgaaa aaaacattac acatatgaag 2461 aggattgtaa tatctttact tgtaccacag atcttattgt acacatttta tactagagaa 2521 aaaccctcag gcagttgtta aaattttgtt gaacatcagg gagtttaaga aaaccctgca 2581 agtataatga atttggaaaa acattttttc aaaaactaca aattataaaa caccaaagtg 2641 ttcatactaa aatatatttt tgcagataca ttaaatatga aagatattca atccaaaatt 2701 aagtctatgt aaatatcagg gaataattca cagtagaaat atctagggca ttcaagcttt 2761 agacattaca ctaaatcaga gtgctgagta tagaaaataa tacaaacaga tttgtctaaa 2821 catttgtgta taactttaaa aatagaatat tttttggagg gttataatta cattcaaagt 2881 actttttttt gaaaatacag atttttttta aaagtgaata atgtgttcaa ctcttaaatt 2941 catgctgttt catcattgct ggtgtattca tatgtgaaag catgtgacta attgttgctg 3001 cataaaagat atgagattat tttttattag gcattattta tgaccttttc tatgaaaaga 3061 taaggacatt aaaatgtaag atgcgtgagg aaaatttagg tagagaggct ctttgtggtt 3121 aacttataat attgagtgat gcatgaggta ggtgttcaga ataatattcc tctgcattat 3181 tatgaatgaa aagcattctt aattttagtt aaaattaagt tagtcatatg ttattttatt 3241 aattgtactt ctatgaaata atatgcagtc tatttttaaa ttataaatta tgtgtgaact 3301 tagcttttca attcaacatt tttaacatat taaatactat tgtgaattca atgaagtgtt 3361 cttatgccac taactttaac ctattccctt actcaaggat gtaggtaaaa gatggtaaca 3421 atacactatt tggtaagata atgtactgac atctctagca atcttttttg ccagtggctt 3481 taaattgcca ataagttaaa gaatattgtt cctatgggtt aaatttttat tcttattttc 3541 acatttaaat ttatttttct taatttttgt ggatacataa tatgtgtata tatgtatgcc 3601 atatatggta tattttgatg caggcatact ctatataata atcacattag aggaaatgag 3661 atatccatta cctctagcat ttattctttt tattacaagc aattcaattg tacactttta 3721 gttattttca aatttacaat gttattgatt acagggtcat ttttatggtc ataataaaaa 3781 attttataca aacgtgtaag atctatacat ttctgagttc tgaataaata tttttaaaaa 3841 tttt //