LOCUS AK303398 1734 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54317 complete cds, highly similar to Natural
resistance-associated macrophage protein 1.
ACCESSION AK303398
VERSION AK303398.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1734
/clone="THYMU3016216"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000498022"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 266..1717
/codon_start=1
/note="highly similar to Natural resistance-associated
macrophage protein 1"
/protein_id="BAG64454.1"
/transl_table=1
/translation="MSIAFLYPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAA
RLGVVTGKDLGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIP
LWGGVLITIVDTFFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRG
LFLPSCPGCGHPELLQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFL
IEATIALSVSFIINLFVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAV
DIYQGGVILGCLFGPAALYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARV
LLTRSCAILPTVLVAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEF
ANGLLNKVVTSSIMVLVCAINLYFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWT
CCLAHGATFLAHSSHHHFLYGLLEEDQKGETSG"
BASE COUNT 302 a 589 c 466 g 377 t
ORIGIN
1 acacttactt gcaccagtgc ccagagaggg ggtgcaggct gaggagctgc ccagagcacc
61 gctcacactc ccagagtacc tgaagtcggc atttcaatga caggtgacaa gggtccccaa
121 aggctaagcg ggtccagcta tggttccatc tccagcccga ccagcccgac cagcccaggg
181 ccacagcaag cacctcccag agagacctac ctgaggcacc ttcagcctgc ggaagctatg
241 ggccttcacg gggcctggct tcctcatgag cattgctttc ctgtacccag gaaacatcga
301 gtcagatctt caggctggcg ccgtggcggg attcaaactt ctctgggtgc tgctctgggc
361 caccgtgttg ggcttgctct gccagcgact ggctgcacgt ctgggcgtgg tgacaggcaa
421 ggacttgggc gaggtctgcc atctctacta ccctaaggtg ccccgcaccg tcctctggct
481 gaccatcgag ctagccattg tgggctccga catgcaggaa gtcatcggca cggccattgc
541 attcaatctg ctctcagctg gacgaatccc actctggggt ggcgtcctca tcaccatcgt
601 ggacaccttc ttcttcctct tcctcgataa ctacgggctg cggaagctgg aagctttttt
661 tggactcctt ataaccatta tggccttgac ctttggctat gagtatgtgg tggcgcgtcc
721 tgagcaggga gcgcttcttc ggggcctgtt cctgccctcg tgcccgggct gcggccaccc
781 cgagctgctg caggcggtgg gcattgttgg cgccatcatc atgccccaca acatctacct
841 gcactcggcc ctggtcaagt ctcgagagat agaccgggcc cgccgagcgg acatcagaga
901 agccaacatg tacttcctga ttgaggccac catcgccctg tccgtctcct ttatcatcaa
961 cctctttgtc atggctgtct ttgggcaggc cttctaccag aaaaccaacc aggctgcgtt
1021 caacatctgt gccaacagca gcctccacga ctacgccaag atcttcccca tgaacaacgc
1081 caccgtggcc gtggacattt accagggggg cgtgatcctg ggctgcctgt tcggccccgc
1141 ggccctctac atctgggcca taggtctcct ggcggctggg cagagctcca ccatgacggg
1201 cacctacgcg ggacagttcg tgatggaggg cttcctgagg ctgcggtggt cacgcttcgc
1261 ccgtgtcctc ctcacccgct cctgcgccat cctgcccacc gtgctcgtgg ctgtcttccg
1321 ggacctgagg gacttgtcgg gcctcaatga tctgctcaac gtgctgcaga gcctgctgct
1381 cccgttcgcc gtgctgccca tcctcacgtt caccagcatg cccaccctca tgcaggagtt
1441 tgccaatggc ctgctgaaca aggtcgtcac ctcttccatc atggtgctag tctgcgccat
1501 caacctctac ttcgtggtca gctatctgcc cagcctgccc caccctgcct acttcggcct
1561 tgcagccttg ctggccgcag cctacctggg cctcagcacc tacctggtct ggacctgttg
1621 ccttgcccac ggagccacct ttctggccca cagctcccac caccacttcc tgtatgggct
1681 ccttgaagag gaccagaaag gggagacctc tggctaggcc cacaccaggg cctg
//