LOCUS AK303368 2744 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51174 complete cds, highly similar to Histone
deacetylase 4.
ACCESSION AK303368
VERSION AK303368.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2744)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2744
/clone="THYMU3011741"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000497992"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 360..2651
/codon_start=1
/note="highly similar to Histone deacetylase 4"
/protein_id="BAH13951.1"
/transl_table=1
/translation="MFDGLSGRDQPVELLNPARVNHMPSTVDVATALPLQVAPSAVPM
DLRLDHQFSLPVAEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQ
LHEHIKQQQEMLAMKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESA
VASTEVKMKLQEFVLNKKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVST
SYNHPVLGMYDAKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALK
KRPLDVTDSACSSAPGSGPSSPNNSSGSVSAENGIAPAVPSIPAETSLAHRLVAREGS
AAPLPLYTSPSLPNITLGLPATGPSAGTAGQQDAERLTLPALQQRLSLFPGTHLTPYL
STSPLERDGGAAHSPLLQHMVLLEQPPAQAPLVTDWYLSGLGALPLHAQSLVGADRVS
PSIHKLRQHRPLGRTQSAPLPQNAQALQHLVIQQQHQQFLEKHKQQFQQQQLQMNKII
PKPSEPARQPESHPEETEEELREHQALLDEPYLDRLPGQKEAHAQAGVQVKQEPIESD
EEEAEPPREVEPGQRQPSEQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSFGGH
RPLSRAQSSPASATFPVSVQEPPTKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRI
QSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLG
SLASVFVRLPCGGVGVSVPLMCK"
BASE COUNT 597 a 900 c 796 g 451 t
ORIGIN
1 aaaatgagga ggcccctgta gagtgcacag cgttcaccca gtgacagtgt gattgtaata
61 gctggggttg ctgggaccct agagtatcca cggtgtgcat gcacttgaac ttcaggatac
121 cctgtttccc tctgaggtgc aagagctctg gcgattccgg atccctactg tgtgtcaggt
181 tctggaagca tcttctctca tctccacgtg atgcccaggg gctcccccag cttctggaag
241 ccaccgcttg tccagggcac cagcccagtc tgtcgtcaag cctggatttg atcttaggtc
301 tggctgcttc cggaataccg agacgggcct ctgctgttcc ctgagcttgc tgtcagcaaa
361 tgtttgatgg actttctggc cgagaccagc cagtggagct gctgaatcct gcccgcgtga
421 accacatgcc cagcacggtg gatgtggcca cggcgctgcc tctgcaagtg gccccctcgg
481 cagtgcccat ggacctgcgc ctggaccacc agttctcact gcctgtggca gagccggccc
541 tgcgggagca gcagctgcag caggagctcc tggcgctcaa gcagaagcag cagatccaga
601 ggcagatcct catcgctgag ttccagaggc agcacgagca gctctcccgg cagcacgagg
661 cgcagctcca cgagcacatc aagcaacaac aggagatgct ggccatgaag caccagcagg
721 agctgctgga acaccagcgg aagctggaga ggcaccgcca ggagcaggag ctggagaagc
781 agcaccggga gcagaagctg cagcagctca agaacaagga gaagggcaaa gagagtgccg
841 tggccagcac agaagtgaag atgaagttac aagaatttgt cctcaataaa aagaaggcgc
901 tggcccaccg gaatctgaac cactgcattt ccagcgaccc tcgctactgg tacgggaaaa
961 cgcagcacag ttcccttgac cagagttctc caccccagag cggagtgtcg acctcctata
1021 accacccggt cctgggaatg tacgacgcca aagatgactt ccctcttagg aaaacagctt
1081 ctgaaccgaa tctgaaatta cggtccaggc taaagcagaa agtggccgaa agacggagca
1141 gccccctgtt acgcaggaaa gacgggccag tggtcactgc tctaaaaaag cgtccgttgg
1201 atgtcacaga ctccgcgtgc agcagcgccc caggctccgg acccagctca cccaacaaca
1261 gctccgggag cgtcagcgcg gagaacggta tcgcgcccgc cgtccccagc atcccggcgg
1321 agacgagttt ggcgcacaga cttgtggcac gagaaggctc ggccgctcca cttcccctct
1381 acacatcgcc atccttgccc aacatcacgc tgggcctgcc tgccaccggc ccctctgcgg
1441 gcacggcggg ccagcaggac gccgagagac tcacccttcc cgccctccag cagaggctct
1501 cccttttccc cggcacccac ctcactccct acctgagcac ctcgcccttg gagcgggacg
1561 gaggggcagc gcacagccct cttctgcagc acatggtctt actggagcag ccgccggcac
1621 aagcacccct cgtcacagac tggtatcttt caggcctggg agcactgccc ctccacgcac
1681 agtccttggt tggtgcagac cgggtgtccc cctccatcca caagctgcgg cagcaccgcc
1741 cactggggcg gacccagtcg gccccgctgc cccagaacgc ccaggctctg cagcacctgg
1801 tcatccagca gcagcatcag cagtttctgg agaaacacaa gcagcagttc cagcagcagc
1861 aactgcagat gaacaagatc atccccaagc caagcgagcc agcccggcag ccggagagcc
1921 acccggagga gacggaggag gagctccgtg agcaccaggc tctgctggac gagccctacc
1981 tggaccggct gccggggcag aaggaggcgc acgcacaggc cggcgtgcag gtgaagcagg
2041 agcccattga gagcgatgag gaagaggcag agcccccacg ggaggtggag ccgggccagc
2101 gccagcccag tgagcaggag ctgctcttca gacagcaagc cctcctgctg gagcagcagc
2161 ggatccacca gctgaggaac taccaggcgt ccatggaggc cgccggcatc cccgtgtcct
2221 tcggcggcca caggcctctg tcccgggcgc agtcctcacc cgcgtctgcc accttccccg
2281 tgtctgtgca ggagcccccc accaagccga ggttcacgac aggcctcgtg tatgacacgc
2341 tgatgctgaa gcaccagtgc acctgcggga gtagcagcag ccaccccgag cacgccggga
2401 ggatccagag catctggtcc cgcctgcagg agacgggcct ccggggcaaa tgcgagtgca
2461 tccgcggacg caaggccacc ctggaggagc tacagacggt gcactcggaa gcccacaccc
2521 tcctgtatgg cacgaacccc ctcaaccggc agaaactgga cagtaagaaa cttctaggct
2581 cgctcgcctc cgtgttcgtc cggctccctt gcggtggtgt tggggtaagt gttcctttaa
2641 tgtgtaaata atgtcctgtt tcttctcgag tcccagtggt cacagaaatc gcagccttgc
2701 ttccctcaaa gtgaataatt gctgccaggt gttttccata cgca
//