LOCUS AK303335 1856 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ60204 complete cds, highly similar to Paired box protein Pax-1. ACCESSION AK303335 VERSION AK303335.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1856) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1856 /clone="THYMU3006733" /clone_lib="THYMU3" /db_xref="H-InvDB:HIT000497959" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thymus" CDS 8..1309 /codon_start=1 /note="highly similar to Paired box protein Pax-1" /protein_id="BAG64398.1" /transl_table=1 /translation="MRRAPLRGSSAPLPTPSQTQAVCPWTPSCLGTHRSPLEVRLGAV PRSAWGPLANPPGVFSPSGSLLSGASAEQTYGEVNQLGGVFVNGRPLPNAIRLRIVEL AQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDY KQGDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPS QPTLPYNHIYQYPYPSPVSPTGAKMGSHPGVPGTAGHVSIPRSWPSAHSVSNILGIRT FMEQTGALAGSEGTAYSPKMEDWAGVNRTAFPATPAVNGLEKPALEADIKYTQSASTL SAVGGFLPACAYPASNQHGVYSAPGGGYLAPGPPWPPAQGPPLAPPGAGVAVHGGELA AAMTFKHPSREVADRKPPSSGSKAPDALSSLHGLPIPASTS" BASE COUNT 288 a 714 c 500 g 354 t ORIGIN 1 aaaaaaaatg cgccgcgctc cactccgcgg ctcctctgcg cccttgccca ctccaagcca 61 gacccaggcg gtttgccctt ggactccgag ctgtctgggg acccacaggt cacctttgga 121 agtgcgcctg ggtgcagtcc ctcgctccgc gtggggaccc ttggctaacc cgccgggtgt 181 tttctccccc tccggctcac tcttgtctgg cgcatccgca gagcagacgt atggcgaggt 241 gaaccagctg ggcggtgtgt tcgtcaacgg ccgccccctg cccaacgcca tccgcttgcg 301 cattgtggag ctggcgcagc tgggcatccg accctgtgac atcagtcggc agctccgcgt 361 atcccacggc tgcgtgagca agatcctggc gcgctacaac gagaccggct ccattctgcc 421 cggggccatc ggggggagca agccccgcgt caccactccc aacgtggtca agcacatccg 481 ggactacaag caaggagacc ctggcatctt tgcctgggag atccgcgacc ggctgctggc 541 cgacggcgtc tgtgacaagt acaatgtgcc ttcggtgagc tccatcagcc gcatcctgcg 601 caacaagatc ggcagcctgg cgcagcccgg accgtacgag gcaagtaagc agccgccgtc 661 gcagcctacg ctgccctaca accacatcta ccagtacccc taccccagtc ccgtgtcgcc 721 cacgggcgcc aagatgggca gccaccccgg ggtcccgggc acggcgggcc acgtcagcat 781 cccgcgctca tggccctcgg cacactcggt cagcaacatc ctgggcatcc ggacgtttat 841 ggagcaaaca ggggccctgg ctgggagcga aggcaccgct tactctccca agatggaaga 901 ctgggccggc gtgaaccgca cggccttccc cgccaccccc gcagtgaatg ggctagagaa 961 acctgcctta gaggcagaca ttaaatacac tcagtcggcc tccaccctct ctgccgtggg 1021 cggctttctc cccgcctgcg cctacccggc ctccaaccag cacggcgtgt acagcgcccc 1081 gggcggcggc tacctcgccc cgggcccgcc gtggccgcct gcgcaaggtc ctcctctggc 1141 gccccccggg gccggcgtag ctgtgcatgg cggggaactc gcggcagcaa tgaccttcaa 1201 gcatcccagc cgagaagtgg ctgacaggaa gcctcccagc tccggcagca aggccccgga 1261 cgccctcagt agcttacacg gactgcccat cccggcctcg acctcctagg ggcagctctc 1321 cccggacccg agcccggagg gaacggcagg cggacccggg cgcacaggtc tgcgcggcgg 1381 ccccggcaat cggcacgggc aggatcggag gactcgcgga ggaggaagcc agtgccggcc 1441 cgcggggtgc acgcccagcc agcccccagg cccagccctg cctctggccg gacccaccac 1501 acttccttta ttggtctggg tttttaggct tctctgaact tgggttttag actgccgtac 1561 cctcctcaca atccttgctc tgacgtggcc tccttcgctc tgccagcttc aaatttcttt 1621 tttgtcactc ccttgtccgt ctccgtctcg cctctctccc tgtttccttc ccccctcttt 1681 ctttctcact ctccctccct tccctttctc tttcccttcc tccctacctt ccaccccggc 1741 tttccccgac cttccagggc tccctctgcc cttccactct cttttccttg ctccgacctc 1801 tgctccagtc ccgcttcttc ccccgtctcc tctttctagt cctctatatg ctatca //