LOCUS AK303315 2970 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59647 complete cds, highly similar to SAPS
domain family member 3.
ACCESSION AK303315
VERSION AK303315.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2970)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2970
/clone="THYMU3004661"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000497939"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 280..2205
/codon_start=1
/note="highly similar to SAPS domain family member 3"
/protein_id="BAG64384.1"
/transl_table=1
/translation="MNDRLGEDESLLMKLYSFLLNDSPLNPLLASFFSKVLSILISRK
PEQIVDFLKKKHDFVDLIIKHIGTSAIMDLLLRLLTCIEPPQPRQDVLNKSVMKTTWG
VLDPPVGNTRLNVIRLISSLLQTNTSSINGDLMELNSIGVILNMFFKYTWNNFLHTQV
EICIALILASPFENTENATITDQDSTGDNLLLKHLFQKCQLIERILEAWEMNEKKQAE
GGRRHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKDLPDEVRERWETFCTSSLGETN
KRNTVDLVTTCHIHSSSDDEIDFKETGFSQDSSLQQAFSDYQMQQMTSNFIDQFGFND
EKFADQDDIGNVSFDRVSDINFTLNTNESGNIALFEACCKERIQQFDDGGSDEEDIWG
EKHIAFTPESQRRSSSGSTDSEESTDSEEEDGAKQDLFEPSSANTEDKMEVDLSEPPN
WSANFDVPMETTHGAPLDSVGSDVWSTEEPMPTKETGWASFSEFTSSLSTKDSLRSNS
PVEMETSTEPMDPLTPSAAALAVQPEAAGSVAMEASSDGEEDAESTDKVTETVMNGGM
KETLSLTVDAKTETAVFKSEEGKLSTSQDAACKDAEECPETAEAKCAAPRPPSSSPEQ
RTGQPSAPGDTSVNGPV"
BASE COUNT 901 a 581 c 692 g 796 t
ORIGIN
1 ttttttgggc gcttcgctga tggtgtcggt gagcgcgttt cccgcctgag cgcaactagc
61 ggcgggtcgt gggcacctcc aggagagctt gtttcatatc catatcccac tgtattcctg
121 ctaatctgct aatgcagtaa attggaggaa aactgttgcc aggataacct gtaatgggca
181 aggagccaca aagaagaaaa catttctttt aatttttaaa cttggtttga aaggtatcca
241 aatatatctt gtgagttgct cacttctgat gtctcccaga tgaatgatag actgggagaa
301 gatgaatcct tgctaatgaa attatatagc ttcctcctaa acgattcccc tttgaatcca
361 ctacttgcca gtttcttcag caaggtgcta agtattctta tcagcagaaa accagaacag
421 attgtggatt tcttaaagaa gaagcatgat tttgtagacc ttattataaa gcacatagga
481 acttctgcta tcatggattt gttgctcagg ctcctgacgt gtatcgaacc tccacagccc
541 aggcaagatg tgctgaataa aagtgtgatg aagaccacat ggggtgtgct ggatcctcct
601 gtggggaata cccggttgaa tgtcattagg ttgatatcca gcctgcttca aaccaatacc
661 agcagtataa atggggacct tatggagctg aatagcattg gagtcatatt gaacatgttc
721 ttcaagtata catggaataa ctttttgcat acacaagtgg aaatttgtat tgcactgatt
781 cttgcaagtc cttttgaaaa cacagaaaat gccacaatta ccgatcaaga ctccactggt
841 gataatttgt tattaaaaca tcttttccaa aaatgtcaat taatagaacg aatacttgaa
901 gcctgggaaa tgaatgagaa gaaacaggct gagggaggaa gacggcatgg ttacatggga
961 cacctaacga ggatagctaa ctgtatcgtg cacagcactg acaagggccc caacagtgca
1021 ttagtgcagc agcttatcaa agatcttccc gacgaagtca gggaacgatg ggagacgttc
1081 tgcacaagct ccttaggaga aactaacaag aggaacacgg tagatctagt tacaacctgc
1141 catattcatt catccagtga tgatgaaatt gactttaaag aaacgggttt ctcacaggat
1201 tcttctttgc agcaagcctt ttctgattat cagatgcaac aaatgacgtc caattttatt
1261 gaccagtttg gcttcaacga tgagaagttt gcagatcaag atgacattgg caatgtttct
1321 tttgatcgag tatcagacat caactttacc ctcaatacaa atgaaagtgg aaatattgcc
1381 ttgtttgaag catgttgtaa ggaaagaata caacagtttg atgatggtgg ctctgatgag
1441 gaagatatat ggggggaaaa gcacatcgca ttcacaccag aatcccaaag acgatccagc
1501 tcggggagta cagacagtga ggaaagtaca gactctgaag aagaagatgg agcaaagcaa
1561 gacttgtttg aacccagcag tgccaacacg gaggataaaa tggaggtgga cctgagtgaa
1621 ccacccaact ggtcagctaa ctttgatgtc ccaatggaaa caacccacgg tgctccattg
1681 gattctgtgg gatctgatgt ctggagcaca gaggagccga tgccaactaa agagacgggc
1741 tgggcttctt tttcagagtt cacgtcttcc ctgagcacaa aagattcttt aaggagtaat
1801 tctccagtgg aaatggaaac cagcactgaa cccatggacc ctctgactcc cagtgcggct
1861 gccctggcag tgcagccaga agcggcaggc agtgtggcca tggaagccag ctctgacgga
1921 gaggaggatg cagaaagtac agacaaggta actgagacag tgatgaatgg cggcatgaag
1981 gaaacgctca gcctcactgt agatgccaag acagagactg cggtcttcaa aagtgaggaa
2041 gggaaactgt ctacctctca agatgctgct tgtaaagacg cagaggagtg tcccgagact
2101 gcagaggcga agtgcgcggc gcccaggcct cccagcagca gtcccgagca gaggactggc
2161 caaccaagcg caccaggtga cacttcagtg aatggccctg tatgacgggt gacgtctgct
2221 gctgctgact gaggactgca gaccgccacc actcaggggc tctggagggg tcagctggag
2281 cccaccaagc tgtcactgct gcactcactc tgcaagggat caggaccagc aacctttata
2341 ttctagattc taagacattg tacagagaaa ttcagaagtg taaaaatatt gcacattgac
2401 aaataccaag aatttttgcg tatgtttata ttgtattgtt ctaaataatg ggtagcctgt
2461 gaaataagat cttgccaccc atgtaataat agtagtaata ctatagttaa aatggctgta
2521 agaatagttt tataaaagtg aatacacaga tctattgtat ttgaaacata actttgacaa
2581 ttattagtgt gaccaaagta ttaggcggtt ttcatacatt tttcaccttg tacaaaatta
2641 tgaattcatt tttcctccag gccgacaagg agttgtagaa tgaaaatgcc ctctaagtgt
2701 tattttggtt gttctaactt acaaaagtga ttttgaataa gaaatatttg gtgttctttt
2761 tataaccagt ttttgattgg taattgtttt ctgtattgtt taaaacggat caaaaatgta
2821 agtctattgg tagagattaa gtaaagtatt tattgctaca tcatagttga taaattgatg
2881 ttatcgtaaa gccatatgtt ctgttcaagt cttgtttgct tgaaatgatt attcctacaa
2941 gtgaaacact agactatttg gagtgtatat
//