LOCUS AK303312 3066 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54526 complete cds, highly similar to 5'-3'
exoribonuclease 2 (EC 3.1.11.-).
ACCESSION AK303312
VERSION AK303312.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3066)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3066
/clone="THYMU3004260"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000497936"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 155..2779
/codon_start=1
/note="highly similar to 5'-3' exoribonuclease 2 (EC
3.1.11.-)"
/protein_id="BAG64381.1"
/transl_table=1
/translation="MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYI
ADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADL
IMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSL
PCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPS
LEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDD
EDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSSGSQVASNPRQAAYEMRMQN
NSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFD
VDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSD
FEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKY
AWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELY
QTGSTEPVEVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDP
QFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFR
TLGHVMPRGSGTGIYSNAAPPPVTYQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPP
LFQQQRFDRGVGAEPLLPWNRMLQTQNAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYP
REGRKYPLPPPSGRYNWN"
BASE COUNT 909 a 616 c 722 g 819 t
ORIGIN
1 ctctttggtt acgctcgtca gccggtcggc cgccgcctcc agccgtgtgc cgctatggga
61 gtcccggcgt tcttccgctg gctcagccgc aagtacccgt ccatcatagt caactgcgtg
121 gaagagaaga ccagcaccaa aaaatgaaga tgaaatgatg gttgcaattt ttgagtacat
181 tgacagactt ttcagtattg taagaccaag aagacttctc tacatggcaa tagatggagt
241 ggcaccacgt gctaaaatga accagcagcg ttcaaggagg ttcagggcat caaaagaagg
301 aatggaagca gcagtcgaga agcagcgagt cagggaagaa atattggcaa aaggtggctt
361 tcttcctcca gaagaaataa aagaaagatt tgacagcaac tgtattacac caggaactga
421 attcatggac aatcttgcta aatgccttcg ctattacata gctgatcgtt taaataatga
481 ccctgggtgg aaaaatttga cagttatttt atctgatgct agtgctcctg gtgaaggaga
541 acataaaatc atggattaca ttagaaggca aagagcccag cctaaccatg acccaaatac
601 tcatcattgt ttatgtggag cagatgctga tctcattatg cttggccttg ccacacatga
661 accgaacttt accattatta gagaagaatt caaaccaaac aagcccaaac catgtggtct
721 ttgtaatcag tttggacatg aggttaaaga ttgtgaaggt ttgccaagag aaaagaaggg
781 aaagcatgat gaacttgccg atagtcttcc ttgtgcagaa ggagagttta tcttccttcg
841 gcttaatgtt cttcgtgagt atttggaaag agaactcaca atggccagcc taccattcac
901 atttgatgtt gagaggagca ttgatgactg ggttttcatg tgcttctttg tgggaaatga
961 cttcctccct catttgccat cgttagagat tagggaaaat gcaattgacc gtttggttaa
1021 catatacaaa aatgtggtac acaaaactgg gggttacctt acagaaagtg gttatgtcaa
1081 tctgcaaaga gtacagatga tcatgttagc agttggtgaa gttgaggata gcatttttaa
1141 aaagagaaag gatgatgagg acagttttag aagacgacag aaagaaaaaa gaaagagaat
1201 gaagagagat caaccagctt tcactcctag tggaatatta actcctcatg ccttgggttc
1261 aagaaattca tcaggttctc aagtagccag taatccgaga caagcagcct atgaaatgag
1321 gatgcagaat aactctagtc cttcgatatc tcctaatacg agtttcacat ctgatggctc
1381 cccgtctcca ttaggaggaa ttaagcgaaa agcagaagac agtgacagtg aacctgagcc
1441 agaggataat gtcaggttat gggaagctgg ctggaagcag cggtactaca agaacaaatt
1501 tgatgtggat gcagctgatg agaaattccg tcggaaagtt gtgcagtcgt acgttgaagg
1561 actttgctgg gttcttagat attattacca gggctgtgct tcctggaagt ggtattatcc
1621 atttcattat gcaccatttg cttcagactt tgaaggcatt gcagacatgc catctgattt
1681 tgagaagggt acgaaaccgt ttaaaccact agaacaactt atgggggtat ttccagctgc
1741 aagtggtaat tttctacctc catcatggcg gaagctcatg agtgatcctg attctagtat
1801 aattgacttc tatcctgaag attttgctat tgatttgaat gggaagaaat atgcatggca
1861 aggtgttgct ctcttgccat tcgtggatga gcgaaggcta cgagctgccc tagaagaggt
1921 atacccagac ctcactccag aagagaccag aagaaacagc cttggaggtg atgtcttatt
1981 tgtggggaaa catcacccac tccatgactt cattttagag ctgtaccaga caggttccac
2041 agagccagtg gaggtacccc ctgaactatg tcatgggatt caaggaaagt tttctttgga
2101 tgaagaagcc attcttccag atcaaatagt atgttctcct gttcctatgt taagggatct
2161 gacacagaac actgtagtca gtattaattt taaagaccca cagtttgctg aagattacat
2221 ttttaaagct gtaatgcttc caggagcaag aaagccagca gcagtactga aacctagtga
2281 ctgggaaaaa tccagcaatg gacggcagtg gaagcctcag cttggcttta accgtgaccg
2341 gaggcctgtg cacctggatc aggcagcctt caggactttg ggccatgtga tgccaagagg
2401 ctcaggaact ggcatttaca gcaatgctgc accaccacct gtgacttacc agggaaactt
2461 atacaggccg cttttgagag gacaagccca gattccaaaa cttatgtcaa atatgaggcc
2521 ccaggattcc tggcgaggtc ctcctcccct tttccagcag caaaggtttg acagaggcgt
2581 tggggctgaa cctctgctcc catggaaccg gatgctgcaa acccagaatg cagccttcca
2641 gccaaaccag taccagatgc tagctgggcc tggtgggtat ccacccagac gagatgatcg
2701 tggagggaga cagggatatc ccagagaagg aaggaaatac cctttgccac caccctcagg
2761 aagatacaat tggaattaag cttttgtaaa gctttcccaa atcctttcat cattctacag
2821 ttttatgcta tttgtggaaa gatttctttc tcaagtagta gtttttaata aaactacagt
2881 actttgtgta tttcttttaa ctgtgtatat ttctactgat ctgatctcac tgtttatgtt
2941 gctttccaaa gatgtatgtt gcataataca gtggatctga atttattatt gcttataaaa
3001 cacatttgat ggaataggag tactggtttt tcataatggt taaaaatgaa accagctgtg
3061 gatttc
//