LOCUS AK303293 995 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61509 complete cds, highly similar to Homo
sapiens sphingomyelin phosphodiesterase 4, neutral membrane,
transcript variant 2, mRNA.
ACCESSION AK303293
VERSION AK303293.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 995)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..995
/clone="THYMU3002147"
/clone_lib="THYMU3"
/db_xref="H-InvDB:HIT000497917"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 220..654
/codon_start=1
/note="highly similar to Homo sapiens sphingomyelin
phosphodiesterase 4, neutral membrane, transcript variant
2, mRNA"
/protein_id="BAG64368.1"
/transl_table=1
/translation="MMKLVYKLQAEDYKFDFPVSYLPGPVKASIQECILPDSPLYHNK
VQFTPTGGLGLNLALNPFEYYIFFFALSLITQKPLPVSLHVRTSDCAYFILVDRYLSW
FLPTEGSVPCHSPPAQGGPAPHRLPGHQPCPLLPMASTTLAS"
BASE COUNT 196 a 320 c 242 g 237 t
ORIGIN
1 gttttggcgc ggtggcggaa tggcggcttc cacctctgaa gcgggcgacg ctatgggtcc
61 cacaggagct gcacaccatc ttcccatggc tggtagagag cattttcggc agcctagacg
121 gtgtcctcgt tggctggaac ctccgctgct tacaggggcg tgagaatcct gtggagtaca
181 gcatcgtgat ggaatttctc gacactgggt agtggcccaa tgatgaagtt ggtttataag
241 cttcaagctg aagactataa gttcgacttt cctgtctcct acctgcctgg tcctgtgaag
301 gcgtccatcc aggagtgcat cctccctgac agtcctctgt accacaacaa ggtccagttc
361 acccctactg ggggccttgg tctgaacctg gccctgaatc cattcgagta ttacatattc
421 ttctttgcct tgagcctcat cactcagaag ccactccctg tgtccctcca cgtccgtact
481 tcagactgtg cctatttcat cctggtggac aggtacctgt catggttcct gcccaccgaa
541 ggcagtgtgc cctgccactc tcctccagcc caggggggac cagcccctca ccgcctccca
601 ggacaccaac catgcccttt gcttcctatg gcctccacca cactagcctc ctgaagcgac
661 acatctctca tcagacgtct gtgaatgcag accccgcctc ccacgagatc tggaggtcag
721 acactgctcc aggtttttgt tgaaatgtgg cttcatcact attcgttgga gatgtatcaa
781 aaaatgcagt cccctcatgc caaggagtcg ttcacgccta ctgaggagca tgtgttggtg
841 gtgcgcctgc tgctgaagca cctgcacgcc tttgccaaca gcctgaagcc agagcaggcc
901 tcaccctccg cccactccca cgccaccagc cccctggagg agttcaaacg ggccgctgtc
961 ccgaggttca tccagcagaa actctacctc ttctt
//