LOCUS AK303259 2096 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56187 complete cds, highly similar to TBC1
domain family member 3.
ACCESSION AK303259
VERSION AK303259.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2096)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2096
/clone="THYMU2037284"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000497883_02"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 523..1782
/codon_start=1
/note="highly similar to TBC1 domain family member 3"
/protein_id="BAG64341.1"
/transl_table=1
/translation="MKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHIL
LAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTV
QGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYL
VEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMK
KLTRKQGDLQPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASP
PRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDV
EGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRAR
DEQPCAPTSGPCLCGLHLESSQFPPGF"
BASE COUNT 482 a 612 c 593 g 409 t
ORIGIN
1 atcattatga aatacgaaaa gggacaccga gctgggctgc cagaggacaa ggggcctaag
61 ccttttcgaa gctacaacaa caacgtcgat catttgggga ttgtacagtc ctgccgctcc
121 tgggagtcag ccccacagga aggcccttgt cctcccttcc ctgtgccttc tcctgggctg
181 agccctgagc tggaaaggga cagagccagt cctttctggg ggtcggcacc caggctgggg
241 ccgctccagg ccccgtgcag ttcctcagct ctgcctgggt tgccttacag tgagacggag
301 ctgcctcctc tgactgcgcg ggaggcgaag caaattcggc gggagatcag ccgaaagagc
361 aagtgggtgg atatgctggg agactgggag aaatacaaaa gcagcagaaa gctcatagat
421 cgagcgtaca agggaatgcc catgaacatc cggggcccga tgtggtcagt cctcctgaac
481 actgaggaaa tgaagttgta aaaccccgga agataccaga tcatgaagga gaagggcaag
541 aggtcatctg agcacatcca gcgcatcgac cgggacgtaa gcgggacatt aaggaagcat
601 atattcttca gggatcgata cggaaccaag cagcgggaac tactccacat cctcctggca
661 tatgaggagt ataacccgga ggtgggctac tgcagggacc tgagccacat cgccgccttg
721 ttcctcctct atcttcctga ggaggatgca ttctgggcac tggtgcagct gctggccagt
781 gagaggcact ccctgcaggg atttcacagc ccaaatggcg ggaccgtcca ggggctccaa
841 gaccaacagg agcatgtggt agccacgtca caacccaaga ccatggggca tcaggacaag
901 aaagatctat gtgggcagtg ttccccgtta ggctgcctca tccggatatt gattgacggg
961 atctctctcg ggctcaccct gcgcctgtgg gacgtgtatc tggtagaagg cgaacaggcg
1021 ttgatgccga taacaagaat cgcctttaag gttcagcaga agcgcctcac gaagacgtcc
1081 aggtgtggcc cgtgggcacg tttttgcaac cggttcgttg atacctgggc cagggatgag
1141 gacactgtgc tcaagcatct tagggcctct atgaagaaac taacaagaaa gcagggggac
1201 ctgcaacccc cagccaaacc cgagcaaggg tcgtcggcat ccaggcctgt gccggcttca
1261 cgtggcggga agaccctctg caagggggac aggcaggccc ctccaggccc accagcccgg
1321 ttcccgcggc ccatttggtc agcttccccg ccacgggcac ctcgttcttc cacaccctgt
1381 cctggtgggg ctgtccggga agacacctac cctgtgggca ctcagggtgt gcccagcccg
1441 gccctggctc agggaggacc tcagggttcc tggagattcc tgcagtggaa ctccatgccc
1501 cgcctcccaa cggacctgga cgtagagggc ccttggttcc gccattatga tttcagacag
1561 agctgctggg tccgtgccat atcccaggag gaccagctgg ccccctgctg gcaggctgaa
1621 caccctgcgg agcgggtgag atcggctttc gctgcaccca gcactgattc cgaccagggc
1681 acccccttca gagctaggga cgaacagccg tgtgctccca cctcagggcc ttgcctctgc
1741 ggcctccact tggaaagttc tcagttccct ccaggcttct agaagcatct gggccagggc
1801 tcatggctgg ataatttccc taggcttaac aacccaagca agcttcgcat cctcgtttta
1861 tttttggtta aacttatgaa aatgtattaa gaaagagtgc agctcgagag agattcagag
1921 atggaacaca ccagacccca gatcacaaag ccaaccatgc ccagcccctc ccagcacccc
1981 cggccccacg accatcgttc tgaattctga cgacaccgtg agcctgcctt tgtacttcaa
2041 actcatggaa ggataaccac cttcatgttt tgaaataaat gtttcctgtt gaaatg
//