LOCUS AK303209 2154 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60202 complete cds, highly similar to Homo
sapiens outer dense fiber of sperm tails 2-like (ODF2L),
transcript variant 1, mRNA.
ACCESSION AK303209
VERSION AK303209.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2154)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2154
/clone="THYMU2030736"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000497833"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 367..2142
/codon_start=1
/note="highly similar to Homo sapiens outer dense fiber
of sperm tails 2-like (ODF2L), transcript variant 1, mRNA"
/protein_id="BAG64299.1"
/transl_table=1
/translation="MEKAVNDGSHSEELFCHLKTISEKEDLPRCTSESHLSCLKQDIL
NEKTELEATLKEAELVTHSVELLLPLFKDTIEKINFENANLSALNLKISEQKEILIKE
LDTFKSVKLALEHLLRKRDYKQTGDNLSSMLLENLTDNESENTNLKKKVFEKEAHIQE
LSCLFQSEKANTLKANRFSQSVKVVHERLQIQIHKREAENDKLKEYVKSLETKIAKWN
LQSRMNKNEAIVMKEASRQKTVALKKASKVYKQRLDHFTGAIEKLTSQIRDQEAKLSE
TISASNAWKSHYEKIVIEKTELEVQIETMKKQIINLLEDLKKMEDHGKNSCEEILRKV
HSIEYENETLNLENTKLKTTLAALKDEVVSVENELSELQEVEKKQKTLIEMYKTQVQK
LQEAAEIVKSRCENLLHKNNQITKTKNKNVEKVDGNHNLLTKLSLEEENCLIQLKCEN
LQQKLEQMDAENKELEKKLANQEECLKHSNLKFKEKSAEYTALARQLEAALEEGRQKV
AEEIEKMSSRESALQIKILDLETELRKKNEEQNQLVCKMNSKAQHQEVCLKEVQNSLE
KSENQNESIKNYLQFLKTSYVTMFE"
BASE COUNT 819 a 364 c 443 g 528 t
ORIGIN
1 gtggggccgc cgttgccaga gaagccacta gccggttact agctcgcttt tgttccactt
61 gagcgggcac tcttctgcgg caagcaggtc taggaattcg cctggttccc acctcgcgtc
121 ccttgccttc cttcctagtc tacccactgt agtgccccct gcgtcccgct ccctcctagc
181 cgactcagag cacaagaagg attgccacgg tttccattgc agcagccgtg gcgcctctga
241 cccttttttt atatcgcggc gacggcgggc tgtcgtcacg acgacgtgcg gacgcagcgg
301 cgggggcctt tcagcttatg tggagaagtc gctgtgaagc cacctataaa tccatttact
361 gaatttatgg agaaggctgt aaatgatgga agtcattcag aagaactctt ttgccatctt
421 aaaactatat cagagaaaga agatttacca cggtgtacca gtgaaagtca tctcagctgc
481 ctgaagcagg acattctaaa tgaaaagact gaattggaag caacacttaa ggaagcggag
541 ttggtaactc attctgtaga attgcttttg ccactattta aggacaccat tgaaaagatt
601 aattttgaaa atgcgaatct ttctgcattg aatttgaaga tttctgaaca gaaggaaata
661 ttaataaaag aattagacac cttcaaaagt gtaaaactag ctttagaaca tcttcttaga
721 aagagagact acaaacaaac aggagacaat ttatccagca tgttgctaga aaatctaact
781 gataatgaaa gtgaaaatac taatcttaag aagaaggtat ttgaaaagga ggcccatatc
841 caagaacttt cttgtttgtt tcagagtgaa aaggcaaata ctttgaaagc aaaccgtttt
901 tcccaatcag taaaagtagt acatgaacga ctacagatcc aaattcataa aagggaagct
961 gagaacgata agttgaaaga atatgtaaag agcttagaaa ccaagatagc caagtggaac
1021 ctgcaatcaa gaatgaataa gaatgaggct atagtgatga aagaagcaag taggcaaaaa
1081 actgtagctt taaaaaaggc atctaaagtt tacaaacaaa ggcttgacca ttttacagga
1141 gctattgaaa agcttacttc ccaaattaga gatcaggaag ccaagttgtc tgaaacaatt
1201 tcagcttcca atgcctggaa aagtcattat gagaaaattg taatagaaaa aaccgaattg
1261 gaagtacaga ttgaaacaat gaaaaagcaa atcattaatc ttttggaaga tctgaagaaa
1321 atggaagacc atggaaaaaa ttcatgtgaa gaaattctta gaaaagttca ctcaattgaa
1381 tatgaaaatg aaactctgaa tcttgagaat acaaaattaa agactacact tgctgctttg
1441 aaggatgaag ttgtatctgt tgaaaatgaa ctctcagaat tgcaagaagt agaaaaaaaa
1501 cagaaaaccc ttattgaaat gtataaaact caggtacaaa agttgcaaga agcagctgaa
1561 atagtaaaaa gcagatgtga aaatttgcta cataaaaata accaaataac aaaaaccaaa
1621 aataaaaatg tagagaaggt tgatggaaat cacaatcttc tgacaaagct ttctctggaa
1681 gaggaaaact gtcttattca gctgaagtgt gaaaaccttc aacaaaaatt agaacagatg
1741 gacgcagaaa ataaagagct tgagaagaag ctggcaaacc aagaagaatg tcttaagcac
1801 agcaatctta agtttaaaga gaaatctgca gaatatacag cattggccag acaactggaa
1861 gctgctttag aagaaggaag acaaaaggtt gctgaagaaa tagagaaaat gtcatctaga
1921 gagagtgctt tacaaattaa aatattagat ctggaaactg agcttagaaa gaaaaatgaa
1981 gagcaaaatc aacttgtttg caaaatgaac agtaaagcac aacatcagga agtgtgtttg
2041 aaagaagtac aaaatagtct tgagaagtcg gaaaatcaaa atgagagtat taagaattat
2101 ttacagtttc ttaaaacttc ttatgtaaca atgtttgaat aaattgtcaa attt
//