LOCUS AK303139 1719 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56669 complete cds, highly similar to
Probable ATP-dependent RNA helicase DDX11 (EC 3.6.1.-).
ACCESSION AK303139
VERSION AK303139.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1719)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1719
/clone="THYMU2014625"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000497763"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 196..1092
/codon_start=1
/note="highly similar to Probable ATP-dependent RNA
helicase DDX11 (EC 3.6.1.-)"
/protein_id="BAG64243.1"
/transl_table=1
/translation="MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFES
PTGTGKSLSLICGALSWLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAA
GTPRPAGEPAWVTQFVQKKEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRL
RQEEEERENLLRLSREMLETGPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDE
DDLEEEHITKIYYCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQVNSSQYFHQGPS
CSFRHNFVLLVQALGDAGSVTG"
BASE COUNT 394 a 421 c 529 g 375 t
ORIGIN
1 aaactcagtg gcgtttgccc tgattcccgg ggcctggctt tcagcgtagc aattctgccg
61 gcgaagaagg tgagcgcagt gctgtgtggt agcagagctc cttaggacga ggagcagcgg
121 gacgaggaag ggcagactgg tgaaatcgca aactgggcgt ctgttccggc gccggacccc
181 tatttgcaaa ggtccatggc taatgaaaca cagaaggttg gtgccatcca ttttcctttt
241 cccttcacac cctattccat ccaggaagac ttcatggcag agctgtaccg ggttttggag
301 gctggcaaga ttgggatatt tgagagtcca actggcactg ggaagtcctt aagtcttatt
361 tgtggggccc tctcttggct ccgtgacttt gaacagaaga agcgtgaaga agaggcacga
421 ctccttgaaa ctggaactgg ccccttacat gatgagaaag atgaatccct gtgtctgtct
481 tcttcctgcg aaggggctgc aggcaccccg aggcctgctg gagaaccggc ctgggttact
541 cagtttgtgc agaagaaaga agagagggac ctggtggacc gactaaaggc ggagcaggcc
601 aggaggaagc agcgagaaga acgcctgcag cagctgcagc acagggtgca gctcaagtat
661 gcagccaagc gcctgaggca ggaagaagaa gaaagagaga atctcctccg cctcagcagg
721 gagatgctag agacaggccc ggaggctgag cggctggagc agctggagtc tggggaggag
781 gagctggtcc tcgccgaata cgagagtgat gaggagaaaa aggtggcgag cagagtggat
841 gaggatgagg atgacctgga ggaagaacac ataactaaga tttattactg tagtcggaca
901 cactcccagc tggcccagtt tgtgcatgag gtgaagaaga gcccctttgg caaggatgtt
961 cggctggtct cccttggctc ccggcaggta aacagtagcc agtatttcca ccaggggcca
1021 tcctgctcct ttcgccacaa ctttgtcctg ctcgtccagg ccttgggaga cgctgggtct
1081 gtgacaggct gaaccgtgtg aggagcagcc ccctccctga cctggccggc ccagcactgg
1141 aaggcaaagg agaggtggcg gggcaggtcc acatgtgttg gtaggatgtc atttagctgg
1201 caccatcttt ttgccccttt ctttctcctt tgctgcagaa cctttgtgta aatgaagacg
1261 tgaaaagcct aggttctgtg cagcttatca acgaccgctg cgtggacatg cagagaagca
1321 ggcacggtag ccactgggac cgtggtgtag ccgcaggtgg tctggagaga gtgaggcagg
1381 ggtggcagtg actgaggacc attaagtgtc tttcatagaa agaatggcag aggagacccc
1441 agttccttcc tgagtcccct ctccttggga aaaagtgttc ctactctctg ggtcagtgtc
1501 tggtccgaat ccttggcttg gagatgattt tacgggctct ttctggagaa cagaagtaaa
1561 accttacagt gttccgatga gaccacagta ggcagtactt gggagggtct tatagacccc
1621 accccacgga agtgggtctc aacattacac aaccccctct tgggcccgtg gacagttgct
1681 gtcctctctg ttttctctct ttgtgcctgt gccaccctc
//